Matrix eQTL: ultra fast eQTL analysis via large matrix operations

Por Shabalin, Andrey A.
Publicado em 2012

Candidate gene methylation studies are at high risk of erroneous conclusions

Por Shabalin, Andrey A, Aberg, Karolina A
Publicado no Epigenomics (2015)

Computational tools for discovery and interpretation of expression quantitative trait loci

Por Wright, Fred A, Shabalin, Andrey A, Rusyn, Ivan
Publicado em 2012

Estimation of cis-eQTL Effect Sizes Using a Log of Linear Model

Por Palowitch, John, Shabalin, Andrey, Zhou, Yi-Hui, Nobel, Andrew B., Wright, Fred A.
Publicado no Biometrics (2017)

An empirical Bayes approach for multiple tissue eQTL analysis

Por Li, Gen, Shabalin, Andrey A, Rusyn, Ivan, Wright, Fred A, Nobel, Andrew B
Publicado no Biostatistics (2018)

Polygenic Risk Scoring and Prediction of Mental Health Outcomes

Por Anderson, John S., Shade, Jess, DiBlasi, Emily, Shabalin, Andrey A., Docherty, Anna R.
Publicado no Curr Opin Psychol (2018)

FastMap: Fast eQTL mapping in homozygous populations

Por Gatti, Daniel M., Shabalin, Andrey A., Lam, Tieu-Chong, Wright, Fred A., Rusyn, Ivan, Nobel, Andrew B.
Publicado em 2009

The Set2/Rpd3S Pathway Suppresses Cryptic Transcription without Regard to Gene Length or Transcription Frequency

Por Lickwar, Colin R., Rao, Bhargavi, Shabalin, Andrey A., Nobel, Andrew B., Strahl, Brian D., Lieb, Jason D.
Publicado em 2009

Sex-specific gene expression in the BXD mouse liver

Por Gatti, Daniel M., Zhao, Ni, Chesler, Elissa J., Bradford, Blair U., Shabalin, Andrey A., Yordanova, Roumyana, Lu, Lu, Rusyn, Ivan
Publicado em 2010

seeQTL: a searchable database for human eQTLs

Por Xia, Kai, Shabalin, Andrey A., Huang, Shunping, Madar, Vered, Zhou, Yi-Hui, Wang, Wei, Zou, Fei, Sun, Wei, Sullivan, Patrick F., Wright, Fred A.
Publicado em 2012

RaMWAS: fast methylome-wide association study pipeline for enrichment platforms

Por Shabalin, Andrey A, Hattab, Mohammad W, Clark, Shaunna L, Chan, Robin F, Kumar, Gaurav, Aberg, Karolina A, van den Oord, Edwin J C G
Publicado no Bioinformatics (2018)

Test-statistic inflation in methylome-wide association studies

Por Guintivano, Jerry, Shabalin, Andrey A, Chan, Robin F., Rubinow, David R., Sullivan, Patrick F., Meltzer-Brody, Samantha, Aberg, Karolina a, van den Oord, Edwin J. C. G.
Publicado no Epigenetics (2020)

A MBD-seq protocol for large-scale methylome-wide studies with (very) low amounts of DNA

Por Aberg, Karolina A., Chan, Robin F., Shabalin, Andrey A., Zhao, Min, Turecki, Gustavo, Staunstrup, Nicklas Heine, Starnawska, Anna, Mors, Ole, Xie, Lin Y., van den Oord, Edwin JCG
Publicado no Epigenetics (2017)

Enrichment methods provide a feasible approach to comprehensive and adequately powered investigations of the brain methylome

Por Chan, Robin F., Shabalin, Andrey A., Xie, Lin Y., Adkins, Daniel E., Zhao, Min, Turecki, Gustavo, Clark, Shaunna L., Aberg, Karolina A., van den Oord, Edwin J.C.G.
Publicado no Nucleic Acids Res (2017)

Molecular Genetic Risk for Psychosis Is Associated With Psychosis Risk Symptoms in a Population-Based UK Cohort: Findings From Generation Scotland

Por Docherty, Anna R, Shabalin, Andrey A, Adkins, Daniel E, Mann, Frank, Krueger, Robert F, Bacanu, Silviu-Alin, Campbell, Archie, Hayward, Caroline, Porteous, David J, McIntosh, Andrew M, Kendler, Kenneth S
Publicado no Schizophr Bull (2020)

A Whole Methylome CpG-SNP Association Study of Psychosis in Blood and Brain Tissue

Por van den Oord, Edwin J. C. G., Clark, Shaunna L., Xie, Lin Ying, Shabalin, Andrey A., Dozmorov, Mikhail G., Kumar, Gaurav, Vladimirov, Vladimir I., Magnusson, Patrik K. E., Aberg, Karolina A.
Publicado no Schizophr Bull (2016)

Independent Methylome-Wide Association Studies of Schizophrenia Detect Consistent Case–Control Differences

Por Chan, Robin F, Shabalin, Andrey A, Montano, Carolina, Hannon, Eilis, Hultman, Christina M, Fallin, Margaret D, Feinberg, Andrew P, Mill, Jonathan, van den Oord, Edwin J C G, Aberg, Karolina A
Publicado no Schizophr Bull (2020)

Quantitative Trait Locus Mapping Methods for Diversity Outbred Mice

Por Gatti, Daniel M., Svenson, Karen L., Shabalin, Andrey, Wu, Long-Yang, Valdar, William, Simecek, Petr, Goodwin, Neal, Cheng, Riyan, Pomp, Daniel, Palmer, Abraham, Chesler, Elissa J., Broman, Karl W., Churchill, Gary A.
Publicado em 2014

A whole methylome study of ethanol exposure in brain and blood: an exploration of the utility of peripheral blood as proxy tissue for brain in alcohol methylation studies

Por Clark, Shaunna L., Costin, Blair N., Chan, Robin F., Johnson, Alexander W., Xie, Linying, Jurmain, Jessica L., Kumar, Gaurav, Shabalin, Andrey A., Pandey, Ashutosh K., Aberg, Karolina A., Miles, Michael F., van den Oord, Edwin
Publicado no Alcohol Clin Exp Res (2018)

Convergence of evidence from a methylome-wide CpG-SNP association study and GWAS of major depressive disorder

Por Aberg, Karolina A., Shabalin, Andrey A., Chan, Robin F., Zhao, Min, Kumar, Gaurav, van Grootheest, Gerard, Clark, Shaunna L., Xie, Lin Y., Milaneschi, Yuri, Penninx, Brenda W. J. H., van den Oord, Edwin J. C. G.
Publicado no Transl Psychiatry (2018)