Building Protein-Protein Interaction Networks with Proteomics and Informatics Tools

מאת Sardiu, Mihaela E., Washburn, Michael P.
יצא לאור 2011

Cysteine-Cysteine Contact Preference Leads to Target-Focusing in Protein Folding

מאת Sardiu, Mihaela E., Cheung, Margaret S., Yu, Yi-Kuo
יצא לאור 2007

Biochemical Reduction of the Topology of the Diverse WDR76 Protein Interactome

מאת Dayebgadoh, Gerald, Sardiu, Mihaela E., Florens, Laurence, Washburn, Michael P.
הוצא לאור ב J Proteome Res (2019)

Identification of Topological Network Modules in Perturbed Protein Interaction Networks

מאת Sardiu, Mihaela E., Gilmore, Joshua M., Groppe, Brad, Florens, Laurence, Washburn, Michael P.
הוצא לאור ב Sci Rep (2017)

Topological scoring of protein interaction networks

מאת Sardiu, Mihaela E., Gilmore, Joshua M., Groppe, Brad D., Dutta, Arnob, Florens, Laurence, Washburn, Michael P.
הוצא לאור ב Nat Commun (2019)

Highly Reproducible Label Free Quantitative Proteomic Analysis of RNA Polymerase Complexes

מאת Mosley, Amber L., Sardiu, Mihaela E., Pattenden, Samantha G., Workman, Jerry L., Florens, Laurence, Washburn, Michael P.
יצא לאור 2011

Determining Protein Complex Connectivity Using a Probabilistic Deletion Network Derived from Quantitative Proteomics

מאת Sardiu, Mihaela E., Gilmore, Joshua M., Carrozza, Michael J., Li, Bing, Workman, Jerry L., Florens, Laurence, Washburn, Michael P.
יצא לאור 2009

Quantitative Proteomics Demonstrates That the RNA Polymerase II Subunits Rpb4 and Rpb7 Dissociate during Transcriptional Elongation

מאת Mosley, Amber L., Hunter, Gerald O., Sardiu, Mihaela E., Smolle, Michaela, Workman, Jerry L., Florens, Laurence, Washburn, Michael P.
יצא לאור 2013

Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics

מאת Sardiu, Mihaela E., Cai, Yong, Jin, Jingji, Swanson, Selene K., Conaway, Ronald C., Conaway, Joan W., Florens, Laurence, Washburn, Michael P.
יצא לאור 2008

Characterization of a Highly Conserved Histone Related Protein, Ydl156w, and Its Functional Associations Using Quantitative Proteomic Analyses

מאת Gilmore, Joshua M., Sardiu, Mihaela E., Venkatesh, Swaminathan, Stutzman, Brent, Peak, Allison, Seidel, Chris W., Workman, Jerry L., Florens, Laurence, Washburn, Michael P.
יצא לאור 2012

Human Family with Sequence Similarity 60 Member A (FAM60A) Protein: a New Subunit of the Sin3 Deacetylase Complex

מאת Smith, Karen T., Sardiu, Mihaela E., Martin-Brown, Skylar A., Seidel, Chris, Mushegian, Arcady, Egidy, Rhonda, Florens, Laurence, Washburn, Michael P., Workman, Jerry L.
יצא לאור 2012

Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes

מאת Lee, Kenneth K, Sardiu, Mihaela E, Swanson, Selene K, Gilmore, Joshua M, Torok, Michael, Grant, Patrick A, Florens, Laurence, Workman, Jerry L, Washburn, Michael P
יצא לאור 2011

The multifunctional autophagy pathway in the human malaria parasite, Plasmodium falciparum

מאת Cervantes, Serena, Bunnik, Evelien M, Saraf, Anita, Conner, Christopher M, Escalante, Aster, Sardiu, Mihaela E, Ponts, Nadia, Prudhomme, Jacques, Florens, Laurence, Le Roch, Karine G
יצא לאור 2014

The WHHERE coactivator complex is required for retinoic acid-dependent regulation of embryonic symmetry

מאת Vilhais-Neto, Gonçalo C., Fournier, Marjorie, Plassat, Jean-Luc, Sardiu, Mihaela E., Saraf, Anita, Garnier, Jean-Marie, Maruhashi, Mitsuji, Florens, Laurence, Washburn, Michael P., Pourquié, Olivier
הוצא לאור ב Nat Commun (2017)

Suberoylanilide Hydroxamic Acid (SAHA)-Induced Dynamics of a Human Histone Deacetylase Protein Interaction Network

מאת Sardiu, Mihaela E., Smith, Karen T., Groppe, Brad D., Gilmore, Joshua M., Saraf, Anita, Egidy, Rhonda, Peak, Allison, Seidel, Chris W., Florens, Laurence, Workman, Jerry L., Washburn, Michael P.
הוצא לאור ב Mol Cell Proteomics (2014)

The chromatin bound proteome of the human malaria parasite

מאת Batugedara, Gayani, Lu, Xueqing M., Saraf, Anita, Sardiu, Mihaela E., Cort, Anthony, Abel, Steven, Prudhomme, Jacques, Washburn, Michael P., Florens, Laurence, Bunnik, Evelien M., Le Roch, Karine G.
הוצא לאור ב Microb Genom (2020)

Conserved abundance and topological features in chromatin-remodeling protein interaction networks

מאת Sardiu, Mihaela E, Gilmore, Joshua M, Groppe, Brad D, Herman, Damir, Ramisetty, Sreenivasa R, Cai, Yong, Jin, Jingji, Conaway, Ronald C, Conaway, Joan W, Florens, Laurence, Washburn, Michael P
הוצא לאור ב EMBO Rep (2015)

Delayed Correlation of mRNA and Protein Expression in Rapamycin-treated Cells and a Role for Ggc1 in Cellular Sensitivity to Rapamycin

מאת Fournier, Marjorie L., Paulson, Ariel, Pavelka, Norman, Mosley, Amber L., Gaudenz, Karin, Bradford, William D., Glynn, Earl, Li, Hua, Sardiu, Mihaela E., Fleharty, Brian, Seidel, Christopher, Florens, Laurence, Washburn, Michael P.
יצא לאור 2010

Dynamic and combinatorial landscape of histone modifications during the intra-erythrocytic developmental cycle of the malaria parasite

מאת Saraf, Anita, Cervantes, Serena, Bunnik, Evelien M., Ponts, Nadia, Sardiu, Mihaela E., Chung, Duk-Won D., Prudhomme, Jacques, Varberg, Joseph M., Wen, Zhihui, Washburn, Michael P., Florens, Laurence, Le Roch, Karine G.
הוצא לאור ב J Proteome Res (2016)

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage

מאת Gilmore, Joshua M., Sardiu, Mihaela E., Groppe, Brad D., Thornton, Janet L., Liu, Xingyu, Dayebgadoh, Gerald, Banks, Charles A., Slaughter, Brian D., Unruh, Jay R., Workman, Jerry L., Florens, Laurence, Washburn, Michael P.
הוצא לאור ב PLoS One (2016)