A hybrid computational strategy to address WGS variant analysis in >5000 samples

par Huang, Zhuoyi, Rustagi, Navin, Veeraraghavan, Narayanan, Carroll, Andrew, Gibbs, Richard, Boerwinkle, Eric, Venkata, Manjunath Gorentla, Yu, Fuli
Publié dans BMC Bioinformatics (2016)

Reduced meiotic recombination in rhesus macaques and the origin of the human recombination landscape

par Xue, Cheng, Rustagi, Navin, Liu, Xiaoming, Raveendran, Muthuswamy, Harris, R. Alan, Venkata, Manjunath Gorentla, Rogers, Jeffrey, Yu, Fuli
Publié dans PLoS One (2020)

ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data

par Rustagi, Navin, Hampton, Oliver A, Li, Jie, Xi, Liu, Gibbs, Richard A., Plon, Sharon E., Kimmel, Marek, Wheeler, David A.
Publié dans BMC Bioinformatics (2016)

Extremely low-coverage whole genome sequencing in South Asians captures population genomics information

par Rustagi, Navin, Zhou, Anbo, Watkins, W. Scott, Gedvilaite, Erika, Wang, Shuoguo, Ramesh, Naveen, Muzny, Donna, Gibbs, Richard A., Jorde, Lynn B., Yu, Fuli, Xing, Jinchuan
Publié dans BMC Genomics (2017)

Practical Approaches for Whole-Genome Sequence Analysis of Heart- and Blood-Related Traits

par Morrison, Alanna C., Huang, Zhuoyi, Yu, Bing, Metcalf, Ginger, Liu, Xiaoming, Ballantyne, Christie, Coresh, Josef, Yu, Fuli, Muzny, Donna, Feofanova, Elena, Rustagi, Navin, Gibbs, Richard, Boerwinkle, Eric
Publié dans Am J Hum Genet (2017)

Genomic profiling of pediatric acute myeloid leukemia reveals a changing mutational landscape from disease diagnosis to relapse

par Farrar, Jason E., Schuback, Heather L., Ries, Rhonda E., Wai, Daniel, Hampton, Oliver A., Trevino, Lisa R., Alonzo, Todd A., Guidry Auvil, Jaime M., Davidsen, Tanja M., Gesuwan, Patee, Hermida, Leandro, Muzny, Donna M., Dewal, Ninad, Rustagi, Navin, Lewis, Lora R., Gamis, Alan S., Wheeler, David A., Smith, Malcolm A., Gerhard, Daniela S., Meshinchi, Soheil
Publié dans Cancer Res (2016)

CD56 expression marks human group 2 innate lymphoid cell divergence from a shared NK cell and group 3 innate lymphoid cell developmental pathway

par Chen, Luxi, Youssef, Youssef, Robinson, Cameron, Ernst, Gabrielle F., Carson, Mary Y., Young, Karen A., Scoville, Steven D., Zhang, Xiaoli, Harris, Regine, Sekhri, Palak, Mansour, Anthony G., Chan, Wing K., Nalin, Ansel P., Mao, Hsiaoyin C., Hughes, Tiffany, Mace, Emily M., Pan, Yinghong, Rustagi, Navin, Chatterjee, Sujash S., Gunaratne, Preethi H., Behbehani, Gregory K., Mundy-Bosse, Bethany L., Caligiuri, Michael A., Freud, Aharon G.
Publié dans Immunity (2018)

Whole-Exome Sequencing Reveals Uncaptured Variation and Distinct Ancestry in the Southern African Population of Botswana

par Retshabile, Gaone, Mlotshwa, Busisiwe C., Williams, Lesedi, Mwesigwa, Savannah, Mboowa, Gerald, Huang, Zhuoyi, Rustagi, Navin, Swaminathan, Shanker, Katagirya, Eric, Kyobe, Samuel, Wayengera, Misaki, Kisitu, Grace P., Kateete, David P., Wampande, Eddie M., Maplanka, Koketso, Kasvosve, Ishmael, Pettitt, Edward D., Matshaba, Mogomotsi, Nsangi, Betty, Marape, Marape, Tsimako-Johnstone, Masego, Brown, Chester W., Yu, Fuli, Kekitiinwa, Adeodata, Joloba, Moses, Mpoloka, Sununguko W., Mardon, Graeme, Anabwani, Gabriel, Hanchard, Neil A.
Publié dans Am J Hum Genet (2018)