Exploring functionally annotated transcriptional consensus regulatory elements with CONREL

Yazar: Dalfovo, Davide, Valentini, Samuel, Romanel, Alessandro
Yayımlandı Database (Oxford) (2020)

EthSEQ: ethnicity annotation from whole exome sequencing data

Yazar: Romanel, Alessandro, Zhang, Tuo, Elemento, Olivier, Demichelis, Francesca
Yayımlandı Bioinformatics (2017)

PaCBAM: fast and scalable processing of whole exome and targeted sequencing data

Yazar: Valentini, Samuel, Fedrizzi, Tarcisio, Demichelis, Francesca, Romanel, Alessandro
Yayımlandı BMC Genomics (2019)

Transcriptional Regulation Is a Major Controller of Cell Cycle Transition Dynamics

Yazar: Romanel, Alessandro, Jensen, Lars Juhl, Cardelli, Luca, Csikász-Nagy, Attila
Baskı/Yayın Bilgisi 2012

ASEQ: fast allele-specific studies from next-generation sequencing data

Yazar: Romanel, Alessandro, Lago, Sara, Prandi, Davide, Sboner, Andrea, Demichelis, Francesca
Yayımlandı BMC Med Genomics (2015)

Inherited variant in NFκB‐1 promoter is associated with increased risk of IBD in an Algerian population and modulates SOX9 binding

Yazar: Hamadou, Imene, Garritano, Sonia, Romanel, Alessandro, Naimi, Dalila, Hammada, Talel, Demichelis, Francesca
Yayımlandı Cancer Rep (Hoboken) (2020)

In silico identification and functional validation of allele-dependent AR enhancers

Yazar: Garritano, Sonia, Romanel, Alessandro, Ciribilli, Yari, Bisio, Alessandra, Gavoci, Antoneta, Inga, Alberto, Demichelis, Francesca
Yayımlandı Oncotarget (2015)

Hit and go CAS9 delivered through a lentiviral based self-limiting circuit

Yazar: Petris, Gianluca, Casini, Antonio, Montagna, Claudia, Lorenzin, Francesca, Prandi, Davide, Romanel, Alessandro, Zasso, Jacopo, Conti, Luciano, Demichelis, Francesca, Cereseto, Anna
Yayımlandı Nat Commun (2017)

ABEMUS: platform-specific and data-informed detection of somatic SNVs in cfDNA

Yazar: Casiraghi, Nicola, Orlando, Francesco, Ciani, Yari, Xiang, Jenny, Sboner, Andrea, Elemento, Olivier, Attard, Gerhardt, Beltran, Himisha, Demichelis, Francesca, Romanel, Alessandro
Yayımlandı Bioinformatics (2020)

A highly specific SpCas9 variant is identified by in vivo screening in yeast

Yazar: Casini, Antonio, Olivieri, Michele, Petris, Gianluca, Montagna, Claudia, Reginato, Giordano, Maule, Giulia, Lorenzin, Francesca, Prandi, Davide, Romanel, Alessandro, Demichelis, Francesca, Inga, Alberto, Cereseto, Anna
Yayımlandı Nat Biotechnol (2018)

Unraveling the clonal hierarchy of somatic genomic aberrations

Yazar: Prandi, Davide, Baca, Sylvan C, Romanel, Alessandro, Barbieri, Christopher E, Mosquera, Juan-Miguel, Fontugne, Jacqueline, Beltran, Himisha, Sboner, Andrea, Garraway, Levi A, Rubin, Mark A, Demichelis, Francesca
Baskı/Yayın Bilgisi 2014

Erratum to: Unraveling the clonal hierarchy of somatic genomic aberrations

Yazar: Prandi, Davide, Baca, Sylvan C., Romanel, Alessandro, Barbieri, Christopher E., Mosquera, Juan-Miguel, Fontugne, Jacqueline, Beltran, Himisha, Sboner, Andrea, Garraway, Levi A., Rubin, Mark A., Demichelis, Francesca
Yayımlandı Genome Biol (2017)

One-shot analysis of translated mammalian lncRNAs with AHARIBO

Yazar: Minati, Luca, Firrito, Claudia, Del Piano, Alessia, Peretti, Alberto, Sidoli, Simone, Peroni, Daniele, Belli, Romina, Gandolfi, Francesco, Romanel, Alessandro, Bernabo, Paola, Zasso, Jacopo, Quattrone, Alessandro, Guella, Graziano, Lauria, Fabio, Viero, Gabriella, Clamer, Massimiliano
Yayımlandı eLife (2021)

Tumor clone dynamics in lethal prostate cancer

Yazar: Carreira, Suzanne, Romanel, Alessandro, Goodall, Jane, Grist, Emily, Ferraldeschi, Roberta, Miranda, Susana, Prandi, Davide, Lorente, David, Frenel, Jean-Sebastien, Pezaro, Carmel, Omlin, Aurelius, Rodrigues, Daniel Nava, Flohr, Penelope, Tunariu, Nina, de Bono, Johann S., Demichelis, Francesca, Attard, Gerhardt
Yayımlandı Sci Transl Med (2014)

Plasma tumour DNA as an early indicator of treatment response in metastatic castration-resistant prostate cancer

Yazar: Conteduca, Vincenza, Wetterskog, Daniel, Scarpi, Emanuela, Romanel, Alessandro, Gurioli, Giorgia, Jayaram, Anuradha, Lolli, Cristian, Tandefelt, Delila Gasi, Schepisi, Giuseppe, Casadei, Chiara, Wingate, Anna, Matteucci, Federica, Paganelli, Giovanni, Gonzalez-Billalabeitia, Enrique, Demichelis, Francesca, De Giorgi, Ugo, Attard, Gerhardt
Yayımlandı Br J Cancer (2020)

Inherited determinants of early recurrent somatic mutations in prostate cancer

Yazar: Romanel, Alessandro, Garritano, Sonia, Stringa, Blerta, Blattner, Mirjam, Dalfovo, Davide, Chakravarty, Dimple, Soong, David, Cotter, Kellie A., Petris, Gianluca, Dhingra, Priyanka, Gasperini, Paola, Cereseto, Anna, Elemento, Olivier, Sboner, Andrea, Khurana, Ekta, Inga, Alberto, Rubin, Mark A., Demichelis, Francesca
Yayımlandı Nat Commun (2017)

Third generation EGFR inhibitor osimertinib combined with pemetrexed or cisplatin exerts long-lasting anti-tumor effect in EGFR-mutated pre-clinical models of NSCLC

Yazar: La Monica, Silvia, Minari, Roberta, Cretella, Daniele, Flammini, Lisa, Fumarola, Claudia, Bonelli, Mara, Cavazzoni, Andrea, Digiacomo, Graziana, Galetti, Maricla, Madeddu, Denise, Falco, Angela, Lagrasta, Costanza Annamaria, Squadrilli, Anna, Barocelli, Elisabetta, Romanel, Alessandro, Quaini, Federico, Petronini, Pier Giorgio, Tiseo, Marcello, Alfieri, Roberta
Yayımlandı J Exp Clin Cancer Res (2019)

Development and validation of a whole-exome sequencing test for simultaneous detection of point mutations, indels and copy-number alterations for precision cancer care

Yazar: Rennert, Hanna, Eng, Kenneth, Zhang, Tuo, Tan, Adrian, Xiang, Jenny, Romanel, Alessandro, Kim, Robert, Tam, Wayne, Liu, Yen-Chun, Bhinder, Bhavneet, Cyrta, Joanna, Beltran, Himisha, Robinson, Brian, Mosquera, Juan Miguel, Fernandes, Helen, Demichelis, Francesca, Sboner, Andrea, Kluk, Michael, Rubin, Mark A, Elemento, Olivier
Yayımlandı NPJ Genom Med (2016)

Circulating tumor DNA profile recognizes transformation to castration-resistant neuroendocrine prostate cancer

Yazar: Beltran, Himisha, Romanel, Alessandro, Conteduca, Vincenza, Casiraghi, Nicola, Sigouros, Michael, Franceschini, Gian Marco, Orlando, Francesco, Fedrizzi, Tarcisio, Ku, Sheng-Yu, Dann, Emma, Alonso, Alicia, Mosquera, Juan Miguel, Sboner, Andrea, Xiang, Jenny, Elemento, Olivier, Nanus, David M., Tagawa, Scott T., Benelli, Matteo, Demichelis, Francesca
Yayımlandı J Clin Invest (2020)

Plasma AR and abiraterone-resistant prostate cancer

Yazar: Romanel, Alessandro, Gasi Tandefelt, Delila, Conteduca, Vincenza, Jayaram, Anuradha, Casiraghi, Nicola, Wetterskog, Daniel, Salvi, Samanta, Amadori, Dino, Zafeiriou, Zafeiris, Rescigno, Pasquale, Bianchini, Diletta, Gurioli, Giorgia, Casadio, Valentina, Carreira, Suzanne, Goodall, Jane, Wingate, Anna, Ferraldeschi, Roberta, Tunariu, Nina, Flohr, Penny, De Giorgi, Ugo, de Bono, Johann S, Demichelis, Francesca, Attard, Gerhardt
Yayımlandı Sci Transl Med (2015)