Quantized correlation coefficient for measuring reproducibility of ChIP-chip data

gan Peng, Shouyong, Kuroda, Mitzi I, Park, Peter J
Cyhoeddwyd 2010

Normalization and experimental design for ChIP-chip data

gan Alekseyenko Artyom A, Peng Shouyong, Larschan Erica, Kuroda Mitzi I, Park Peter J
Cyhoeddwyd 2007-06-01

Normalization and experimental design for ChIP-chip data

gan Peng, Shouyong, Alekseyenko, Artyom A, Larschan, Erica, Kuroda, Mitzi I, Park, Peter J
Cyhoeddwyd 2007

Drosophila MSL complex globally acetylates H4 Lys16 on the male X chromosome for dosage compensation

gan Gelbart, Marnie E., Larschan, Erica, Peng, Shouyong, Park, Peter J., Kuroda, Mitzi I.
Cyhoeddwyd 2009

p53 prevents neurodegeneration by regulating synaptic genes

gan Merlo, Paola, Frost, Bess, Peng, Shouyong, Yang, Yawei J., Park, Peter J., Feany, Mel
Cyhoeddwyd yn Proc Natl Acad Sci U S A (2014)

The MSL3 chromodomain directs a key targeting step for dosage compensation of the Drosophila X chromosome

gan Sural, Tuba H., Peng, Shouyong, Li, Bing, Workman, Jerry L., Park, Peter J., Kuroda, Mitzi I.
Cyhoeddwyd 2008

Somatic Mutational Landscape of Splicing Factor Genes and Their Functional Consequences across 33 Cancer Types

gan Seiler, Michael, Peng, Shouyong, Agrawal, Anant A., Palacino, James, Teng, Teng, Zhu, Ping, Smith, Peter G., Buonamici, Silvia, Yu, Lihua
Cyhoeddwyd yn Cell Rep (2018)

SOX15 Governs Transcription in Human Stratified Epithelia and a Subset of Esophageal Adenocarcinomas

gan Sulahian, Rita, Chen, Justina, Arany, Zoltan, Jadhav, Unmesh, Peng, Shouyong, Rustgi, Anil K., Bass, Adam J., Srivastava, Amitabh, Hornick, Jason L., Shivdasani, Ramesh A.
Cyhoeddwyd yn Cell Mol Gastroenterol Hepatol (2015)

Identification of Chromatin-Associated Regulators of MSL Complex Targeting in Drosophila Dosage Compensation

gan Larschan, Erica, Soruco, Marcela M. L., Lee, Ok-Kyung, Peng, Shouyong, Bishop, Eric, Chery, Jessica, Goebel, Karen, Feng, Jessica, Park, Peter J., Kuroda, Mitzi I.
Cyhoeddwyd 2012

Conservation and de novo acquisition of dosage compensation on newly evolved sex chromosomes in Drosophila

gan Alekseyenko, Artyom A., Ellison, Christopher E., Gorchakov, Andrey A., Zhou, Qi, Kaiser, Vera B., Toda, Nick, Walton, Zaak, Peng, Shouyong, Park, Peter J., Bachtrog, Doris, Kuroda, Mitzi I.
Cyhoeddwyd 2013

Somatic copy number alterations in gastric adenocarcinomas among Asian and Western patients

gan Schumacher, Steven E., Shim, Byoung Yong, Corso, Giovanni, Ryu, Min-Hee, Kang, Yoon-Koo, Roviello, Franco, Saksena, Gordon, Peng, Shouyong, Shivdasani, Ramesh A., Bass, Adam J., Beroukhim, Rameen
Cyhoeddwyd yn PLoS One (2017)

Mutant N-Ras protects colorectal cancer cells from stress-induced apoptosis and contributes to cancer development and progression

gan Wang, Yufang, Velho, Sérgia, Vakiani, Efsevia, Peng, Shouyong, Bass, Adam J., Chu, Gerald C., Gierut, Jessica, Bugni, James M., Der, Channing J., Philips, Mark, Solit, David B., Haigis, Kevin M.
Cyhoeddwyd 2012

Src Mutation Induces Acquired Lapatinib Resistance in ERBB2-Amplified Human Gastroesophageal Adenocarcinoma Models

gan Hong, Yong Sang, Kim, Jihun, Pectasides, Eirini, Fox, Cameron, Hong, Seung-Woo, Ma, Qiuping, Wong, Gabrielle S., Peng, Shouyong, Stachler, Matthew D., Thorner, Aaron R., Van Hummelen, Paul, Bass, Adam J.
Cyhoeddwyd 2014

A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome

gan Alekseyenko, Artyom A., Peng, Shouyong, Larschan, Erica, Gorchakov, Andrey A., Lee, Ok-Kyung, Kharchenko, Peter, McGrath, Sean D., Wang, Charlotte I., Mardis, Elaine R., Park, Peter J., Kuroda, Mitzi I.
Cyhoeddwyd 2008

Analyses of clinicopathological, molecular, and prognostic associations of KRAS codon 61 and codon 146 mutations in colorectal cancer: cohort study and literature review

gan Imamura, Yu, Lochhead, Paul, Yamauchi, Mai, Kuchiba, Aya, Qian, Zhi Rong, Liao, Xiaoyun, Nishihara, Reiko, Jung, Seungyoun, Wu, Kana, Nosho, Katsuhiko, Wang, Yaoyu E, Peng, Shouyong, Bass, Adam J, Haigis, Kevin M, Meyerhardt, Jeffrey A, Chan, Andrew T, Fuchs, Charles S, Ogino, Shuji
Cyhoeddwyd 2014

Integrated cistromic and expression analysis of amplified NKX2-1 in lung adenocarcinoma identifies LMO3 as a functional transcriptional target

gan Watanabe, Hideo, Francis, Joshua M., Woo, Michele S., Etemad, Banafsheh, Lin, Wenchu, Fries, Daniel F., Peng, Shouyong, Snyder, Eric L., Tata, Purushothama Rao, Izzo, Francesca, Schinzel, Anna C., Cho, Jeonghee, Hammerman, Peter S., Verhaak, Roel G., Hahn, William C., Rajagopal, Jayaraj, Jacks, Tyler, Meyerson, Matthew
Cyhoeddwyd 2013

Preexisting oncogenic events impact trastuzumab sensitivity in ERBB2-amplified gastroesophageal adenocarcinoma

gan Kim, Jihun, Fox, Cameron, Peng, Shouyong, Pusung, Mark, Pectasides, Eirini, Matthee, Eric, Hong, Yong Sang, Do, In-Gu, Jang, Jiryeon, Thorner, Aaron R., Van Hummelen, Paul, Rustgi, Anil K., Wong, Kwok-Kin, Zhou, Zhongren, Tang, Ping, Kim, Kyoung-Mee, Lee, Jeeyun, Bass, Adam J.
Cyhoeddwyd yn J Clin Invest (2014)

SOX2 and p63 colocalize at genetic loci in squamous cell carcinomas

gan Watanabe, Hideo, Ma, Qiuping, Peng, Shouyong, Adelmant, Guillaume, Swain, Danielle, Song, Wenyu, Fox, Cameron, Francis, Joshua M., Pedamallu, Chandra Sekhar, DeLuca, David S., Brooks, Angela N., Wang, Su, Que, Jianwen, Rustgi, Anil K., Wong, Kwok-kin, Ligon, Keith L., Liu, X. Shirley, Marto, Jarrod A., Meyerson, Matthew, Bass, Adam J.
Cyhoeddwyd 2014

Sequence-Specific Targeting of Dosage Compensation in Drosophila Favors an Active Chromatin Context

gan Alekseyenko, Artyom A., Ho, Joshua W. K., Peng, Shouyong, Gelbart, Marnie, Tolstorukov, Michael Y., Plachetka, Annette, Kharchenko, Peter V., Jung, Youngsook L., Gorchakov, Andrey A., Larschan, Erica, Gu, Tingting, Minoda, Aki, Riddle, Nicole C., Schwartz, Yuri B., Elgin, Sarah C. R., Karpen, Gary H., Pirrotta, Vincenzo, Kuroda, Mitzi I., Park, Peter J.
Cyhoeddwyd 2012

Correction: Sequence-Specific Targeting of Dosage Compensation in Drosophila Favors an Active Chromatin Context

gan Alekseyenko, Artyom A., Ho, Joshua W. K., Peng, Shouyong, Gelbart, Marnie, Tolstorukov, Michael Y., Plachetka, Annette, Kharchenko, Peter V., Jung, Youngsook L., Gorchakov, Andrey A., Larschan, Erica, Gu, Tingting, Minoda, Aki, Riddle, Nicole C., Schwartz, Yuri B., Elgin, Sarah C. R., Karpen, Gary H., Pirrotta, Vincenzo, Kuroda, Mitzi I., Park, Peter J.
Cyhoeddwyd 2014