SPA: A Probabilistic Algorithm for Spliced Alignment

由 van Nimwegen, Erik, Paul, Nicodeme, Sheridan, Robert, Zavolan, Mihaela
出版 2006

Computational Analysis of Full-length cDNAs Reveals Frequent Coupling Between Transcriptional and Splicing Programs

由 Chern, Tzu-Ming, Paul, Nicodeme, van Nimwegen, Erik, Zavolan, Mihaela
出版 2008

Expression proteomics of UPF1 knockdown in HeLa cells reveals autoregulation of hnRNP A2/B1 mediated by alternative splicing resulting in nonsense-mediated mRNA decay

由 McGlincy, Nicholas J, Tan, Lit-Yeen, Paul, Nicodeme, Zavolan, Mihaela, Lilley, Kathryn S, Smith, Christopher WJ
出版 2010

Identification of clustered microRNAs using an ab initio prediction method

由 Sewer, Alain, Paul, Nicodème, Landgraf, Pablo, Aravin, Alexei, Pfeffer, Sébastien, Brownstein, Michael J, Tuschl, Thomas, van Nimwegen, Erik, Zavolan, Mihaela
出版 2005

Cullin 3 mediates SRC-3 ubiquitination and degradation to control the retinoic acid response

由 Ferry, Christine, Gaouar, Samia, Fischer, Benoit, Boeglin, Marcel, Paul, Nicodeme, Samarut, Eric, Piskunov, Aleksandr, Pankotai-Bodo, Gabriella, Brino, Laurent, Rochette-Egly, Cecile
出版 2011

Circulating Human Eosinophils Share a Similar Transcriptional Profile in Asthma and Other Hypereosinophilic Disorders

由 Barnig, Cindy, Alsaleh, Ghada, Jung, Nicolas, Dembélé, Doulaye, Paul, Nicodème, Poirot, Anh, Uring-Lambert, Béatrice, Georgel, Philippe, de Blay, Fréderic, Bahram, Seiamak
發表在 PLoS One (2015)

Protein-altering MYH3 variants are associated with a spectrum of phenotypes extending to spondylocarpotarsal synostosis syndrome

由 Carapito, Raphael, Goldenberg, Alice, Paul, Nicodème, Pichot, Angélique, David, Albert, Hamel, Antoine, Dumant-Forest, Clémentine, Leroux, Julien, Ory, Benjamin, Isidor, Bertrand, Bahram, Seiamak
發表在 Eur J Hum Genet (2016)

Whole-Genome Sequencing of Seven Strains of Staphylococcus lugdunensis Allows Identification of Mobile Genetic Elements

由 Argemi, Xavier, Martin, Véronique, Loux, Valentin, Dahyot, Sandrine, Lebeurre, Jérémie, Guffroy, Aurélien, Martin, Mickael, Velay, Aurélie, Keller, Daniel, Riegel, Philippe, Hansmann, Yves, Paul, Nicodème, Prévost, Gilles
發表在 Genome Biol Evol (2017)

Multi-omics dataset to decipher the complexity of drug resistance in diffuse large B-cell lymphoma

由 Fornecker, Luc-Matthieu, Muller, Leslie, Bertrand, Frédéric, Paul, Nicodème, Pichot, Angélique, Herbrecht, Raoul, Chenard, Marie-Pierre, Mauvieux, Laurent, Vallat, Laurent, Bahram, Seiamak, Cianférani, Sarah, Carapito, Raphaël, Carapito, Christine
發表在 Sci Rep (2019)

An unusually high substitution rate in transplant-associated BK polyomavirus in vivo is further concentrated in HLA-C-bound viral peptides

由 Domingo-Calap, Pilar, Schubert, Benjamin, Joly, Mélanie, Solis, Morgane, Untrau, Meiggie, Carapito, Raphael, Georgel, Philippe, Caillard, Sophie, Fafi-Kremer, Samira, Paul, Nicodème, Kohlbacher, Oliver, González-Candelas, Fernando, Bahram, Seiamak
發表在 PLoS Pathog (2018)

Ubiquitin receptor protein UBASH3B drives Aurora B recruitment to mitotic microtubules

由 Krupina, Ksenia, Kleiss, Charlotte, Metzger, Thibaud, Fournane, Sadek, Schmucker, Stephane, Hofmann, Kay, Fischer, Benoit, Paul, Nicodeme, Porter, Iain Malcolm, Raffelsberger, Wolfgang, Poch, Olivier, Swedlow, Jason Reese, Brino, Laurent, Sumara, Izabela
發表在 Dev Cell (2016)

Matrix-targeting immunotherapy controls tumor growth and spread by switching macrophage phenotype

由 Deligne, Claire, Murdamoothoo, Devadarssen, Gammage, Anis N., Gschwandtner, Martha, Erne, William, Loustau, Thomas, Marzeda, Anna M., Carapito, Raphael, Paul, Nicodème, Velazquez-Quesada, Inés, Mazzier, Imogen, Sun, Zhen, Orend, Gertraud, Midwood, Kim S.
發表在 Cancer Immunol Res (2020)

Impairing flow-mediated endothelial remodeling reduces extravasation of tumor cells

由 Follain, Gautier, Osmani, Naël, Gensbittel, Valentin, Asokan, Nandini, Larnicol, Annabel, Mercier, Luc, Garcia-Leon, Maria Jesus, Busnelli, Ignacio, Pichot, Angelique, Paul, Nicodème, Carapito, Raphaël, Bahram, Seiamak, Lefebvre, Olivier, Goetz, Jacky G.
發表在 Sci Rep (2021)

A mouse model of MSU-induced acute inflammation in vivo suggests imiquimod-dependent targeting of Il-1β as relevant therapy for gout patients

由 Mariotte, Alexandre, De Cauwer, Aurore, Po, Chrystelle, Abou-Faycal, Chérine, Pichot, Angélique, Paul, Nicodème, Aouadi, Ismael, Carapito, Raphael, Frisch, Benoit, Macquin, Cécile, Chatelus, Emmanuel, Sibilia, Jean, Armspach, Jean-Paul, Bahram, Seiamak, Georgel, Philippe
發表在 Theranostics (2020)

Impact of Tenascin-C on Radiotherapy in a Novel Syngeneic Oral Squamous Cell Carcinoma Model With Spontaneous Dissemination to the Lymph Nodes

由 Spenlé, Caroline, Loustau, Thomas, Burckel, Hélène, Riegel, Gilles, Abou Faycal, Chérine, Li, Chengbei, Yilmaz, Alev, Petti, Luciana, Steinbach, Fanny, Ahowesso, Constance, Jost, Camille, Paul, Nicodème, Carapito, Raphael, Noël, Georges, Anjuère, Fabienne, Salomé, Nathalie, Orend, Gertraud
發表在 Front Immunol (2021)

HIV-Specific B Cell Frequency Correlates with Neutralization Breadth in Patients Naturally Controlling HIV-Infection

由 Rouers, Angeline, Klingler, Jéromine, Su, Bin, Samri, Assia, Laumond, Géraldine, Even, Sophie, Avettand-Fenoel, Véronique, Richetta, Clemence, Paul, Nicodème, Boufassa, Faroudy, Hocqueloux, Laurent, Mouquet, Hugo, Rouzioux, Christine, Lambotte, Olivier, Autran, Brigitte, Graff-Dubois, Stéphanie, Moog, Christiane, Moris, Arnaud
發表在 EBioMedicine (2017)

Multi-OMICS analyses unveil STAT1 as a potential modifier gene in mevalonate kinase deficiency

由 Carapito, Raphael, Carapito, Christine, Morlon, Aurore, Paul, Nicodème, Vaca Jacome, Alvaro Sebastian, Alsaleh, Ghada, Rolli, Véronique, Tahar, Ouria, Aouadi, Ismail, Rompais, Magali, Delalande, François, Pichot, Angélique, Georgel, Philippe, Messer, Laurent, Sibilia, Jean, Cianferani, Sarah, Van Dorsselaer, Alain, Bahram, Seiamak
發表在 Ann Rheum Dis (2018)

Temporal multiomic modeling reveals a B-cell receptor proliferative program in chronic lymphocytic leukemia

由 Schleiss, Cedric, Carapito, Raphael, Fornecker, Luc-Matthieu, Muller, Leslie, Paul, Nicodème, Tahar, Ouria, Pichot, Angelique, Tavian, Manuela, Nicolae, Alina, Miguet, Laurent, Mauvieux, Laurent, Herbrecht, Raoul, Cianferani, Sarah, Freund, Jean-Noel, Carapito, Christine, Maumy-Bertrand, Myriam, Bahram, Seiamak, Bertrand, Frederic, Vallat, Laurent
發表在 Leukemia (2021)

Tenascin‐C immobilizes infiltrating T lymphocytes through CXCL12 promoting breast cancer progression

由 Murdamoothoo, Devadarssen, Sun, Zhen, Yilmaz, Alev, Riegel, Gilles, Abou‐Faycal, Chérine, Deligne, Claire, Velazquez‐Quesada, Ines, Erne, William, Nascimento, Marine, Mörgelin, Matthias, Cremel, Gérard, Paul, Nicodème, Carapito, Raphael, Veber, Romain, Dumortier, Hélène, Yuan, Jingping, Midwood, Kim S, Loustau, Thomas, Orend, Gertraud
發表在 EMBO Mol Med (2021)

A new MHC-linked susceptibility locus for primary Sjögren’s syndrome: MICA

由 Carapito, Raphael, Gottenberg, Jacques-Eric, Kotova, Irina, Untrau, Meiggie, Michel, Sandra, Naegely, Lydie, Aouadi, Ismail, Kwemou, Marius, Paul, Nicodème, Pichot, Angélique, Locke, James, Bowman, Simon J., Griffiths, Bridget, Sivils, Kathy L., Sibilia, Jean, Inoko, Hidetoshi, Micelli-Richard, Corinne, Nocturne, Gaétane, Ota, Masao, Ng, Wan-Fai, Mariette, Xavier, Bahram, Seiamak
發表在 Hum Mol Genet (2017)