The Gumbel pre-factor k for gapped local alignment can be estimated from simulations of global alignment

av Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Publicerad 2005

ESTIMATING THE GUMBEL SCALE PARAMETER FOR LOCAL ALIGNMENT OF RANDOM SEQUENCES BY IMPORTANCE SAMPLING WITH STOPPING TIMES

av Park, Yonil, Sheetlin, Sergey, Spouge, John L.
Publicerad 2009

Objective method for estimating asymptotic parameters, with an application to sequence alignment

av Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Publicerad 2011

ALP & FALP: C++ libraries for pairwise local alignment E-values

av Sheetlin, Sergey, Park, Yonil, Frith, Martin C., Spouge, John L.
I publikationen Bioinformatics (2016)

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks

av Frith, Martin C., Park, Yonil, Sheetlin, Sergey L., Spouge, John L.
Publicerad 2008

Frameshift alignment: statistics and post-genomic applications

av Sheetlin, Sergey L., Park, Yonil, Frith, Martin C., Spouge, John L.
I publikationen Bioinformatics (2014)

New finite-size correction for local alignment score distributions

av Park, Yonil, Sheetlin, Sergey, Ma, Ning, Madden, Thomas L, Spouge, John L
Publicerad 2012

The identification of complete domains within protein sequences using accurate E-values for semi-global alignment

av Kann, Maricel G., Sheetlin, Sergey L., Park, Yonil, Bryant, Stephen H., Spouge, John L.
Publicerad 2007