The Gumbel pre-factor k for gapped local alignment can be estimated from simulations of global alignment

Por Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Publicado em 2005

ESTIMATING THE GUMBEL SCALE PARAMETER FOR LOCAL ALIGNMENT OF RANDOM SEQUENCES BY IMPORTANCE SAMPLING WITH STOPPING TIMES

Por Park, Yonil, Sheetlin, Sergey, Spouge, John L.
Publicado em 2009

Objective method for estimating asymptotic parameters, with an application to sequence alignment

Por Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Publicado em 2011

ALP & FALP: C++ libraries for pairwise local alignment E-values

Por Sheetlin, Sergey, Park, Yonil, Frith, Martin C., Spouge, John L.
Publicado no Bioinformatics (2016)

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks

Por Frith, Martin C., Park, Yonil, Sheetlin, Sergey L., Spouge, John L.
Publicado em 2008

Frameshift alignment: statistics and post-genomic applications

Por Sheetlin, Sergey L., Park, Yonil, Frith, Martin C., Spouge, John L.
Publicado no Bioinformatics (2014)

New finite-size correction for local alignment score distributions

Por Park, Yonil, Sheetlin, Sergey, Ma, Ning, Madden, Thomas L, Spouge, John L
Publicado em 2012

The identification of complete domains within protein sequences using accurate E-values for semi-global alignment

Por Kann, Maricel G., Sheetlin, Sergey L., Park, Yonil, Bryant, Stephen H., Spouge, John L.
Publicado em 2007