The Gumbel pre-factor k for gapped local alignment can be estimated from simulations of global alignment

por Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Publicado 2005

ESTIMATING THE GUMBEL SCALE PARAMETER FOR LOCAL ALIGNMENT OF RANDOM SEQUENCES BY IMPORTANCE SAMPLING WITH STOPPING TIMES

por Park, Yonil, Sheetlin, Sergey, Spouge, John L.
Publicado 2009

Objective method for estimating asymptotic parameters, with an application to sequence alignment

por Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Publicado 2011

ALP & FALP: C++ libraries for pairwise local alignment E-values

por Sheetlin, Sergey, Park, Yonil, Frith, Martin C., Spouge, John L.
Publicado en Bioinformatics (2016)

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks

por Frith, Martin C., Park, Yonil, Sheetlin, Sergey L., Spouge, John L.
Publicado 2008

Frameshift alignment: statistics and post-genomic applications

por Sheetlin, Sergey L., Park, Yonil, Frith, Martin C., Spouge, John L.
Publicado en Bioinformatics (2014)

New finite-size correction for local alignment score distributions

por Park, Yonil, Sheetlin, Sergey, Ma, Ning, Madden, Thomas L, Spouge, John L
Publicado 2012

The identification of complete domains within protein sequences using accurate E-values for semi-global alignment

por Kann, Maricel G., Sheetlin, Sergey L., Park, Yonil, Bryant, Stephen H., Spouge, John L.
Publicado 2007