The Gumbel pre-factor k for gapped local alignment can be estimated from simulations of global alignment

ανά Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Έκδοση 2005

ESTIMATING THE GUMBEL SCALE PARAMETER FOR LOCAL ALIGNMENT OF RANDOM SEQUENCES BY IMPORTANCE SAMPLING WITH STOPPING TIMES

ανά Park, Yonil, Sheetlin, Sergey, Spouge, John L.
Έκδοση 2009

Objective method for estimating asymptotic parameters, with an application to sequence alignment

ανά Sheetlin, Sergey, Park, Yonil, Spouge, John L.
Έκδοση 2011

ALP & FALP: C++ libraries for pairwise local alignment E-values

ανά Sheetlin, Sergey, Park, Yonil, Frith, Martin C., Spouge, John L.
Τόπος έκδοσης Bioinformatics (2016)

The whole alignment and nothing but the alignment: the problem of spurious alignment flanks

ανά Frith, Martin C., Park, Yonil, Sheetlin, Sergey L., Spouge, John L.
Έκδοση 2008

Frameshift alignment: statistics and post-genomic applications

ανά Sheetlin, Sergey L., Park, Yonil, Frith, Martin C., Spouge, John L.
Τόπος έκδοσης Bioinformatics (2014)

New finite-size correction for local alignment score distributions

ανά Park, Yonil, Sheetlin, Sergey, Ma, Ning, Madden, Thomas L, Spouge, John L
Έκδοση 2012

The identification of complete domains within protein sequences using accurate E-values for semi-global alignment

ανά Kann, Maricel G., Sheetlin, Sergey L., Park, Yonil, Bryant, Stephen H., Spouge, John L.
Έκδοση 2007