Structure of Apolipoprotein A-I N Terminus on Nascent High Density Lipoproteins

af Lagerstedt, Jens O., Cavigiolio, Giorgio, Budamagunta, Madhu S., Pagani, Ioanna, Voss, John C., Oda, Michael N.
Udgivet 2011

Modifying Apolipoprotein A-I by Malondialdehyde, but Not by an Array of Other Reactive Carbonyls, Blocks Cholesterol Efflux by the ABCA1 Pathway

af Shao, Baohai, Pennathur, Subramaniam, Pagani, Ioanna, Oda, Michael N., Witztum, Joseph L., Oram, John F., Heinecke, Jay W.
Udgivet 2010

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

af Pagani, Ioanna, Liolios, Konstantinos, Jansson, Jakob, Chen, I-Min A., Smirnova, Tatyana, Nosrat, Bahador, Markowitz, Victor M., Kyrpides, Nikos C.
Udgivet 2012

The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification

af Reddy, T.B.K., Thomas, Alex D., Stamatis, Dimitri, Bertsch, Jon, Isbandi, Michelle, Jansson, Jakob, Mallajosyula, Jyothi, Pagani, Ioanna, Lobos, Elizabeth A., Kyrpides, Nikos C.
Udgivet i Nucleic Acids Res (2014)

The Metadata Coverage Index (MCI): A standardized metric for quantifying database metadata richness

af Liolios, Konstantinos, Schriml, Lynn, Hirschman, Lynette, Pagani, Ioanna, Nosrat, Bahador, Sterk, Peter, White, Owen, Rocca-Serra, Philippe, Sansone, Susanna-Assunta, Taylor, Chris, Kyrpides, Nikos C., Field, Dawn
Udgivet 2012

IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project

af Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Jacob, Biju, Ratner, Anna, Liolios, Konstantinos, Pagani, Ioanna, Huntemann, Marcel, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Udgivet 2012

Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece

af Reeve, Wayne, Ballard, Ross, Howieson, John, Drew, Elizabeth, Tian, Rui, Bräu, Lambert, Munk, Christine, Davenport, Karen, Chain, Patrick, Goodwin, Lynne, Pagani, Ioanna, Huntemann, Marcel, Mavrommatis, Konstantinos, Pati, Amrita, Markowitz, Victor, Ivanova, Natalia, Woyke, Tanja, Kyrpides, Nikos
Udgivet 2013

IMG/M: the integrated metagenome data management and comparative analysis system

af Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Grechkin, Yuri, Ratner, Anna, Jacob, Biju, Pati, Amrita, Huntemann, Marcel, Liolios, Konstantinos, Pagani, Ioanna, Anderson, Iain, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Udgivet 2012

Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California

af Hawley, Erik R., Piao, Hailan, Scott, Nicole M., Malfatti, Stephanie, Pagani, Ioanna, Huntemann, Marcel, Chen, Amy, Glavina del Rio, Tijana, Foster, Brian, Copeland, Alex, Jansson, Janet, Pati, Amrita, Tringe, Susannah, Gilbert, Jack A., Lorenson, Thomas D., Hess, Matthias
Udgivet 2014

Permanent Draft Genome Sequence of Nocardia sp. BMG111209, an Actinobacterium Isolated from Nodules of Casuarina glauca

af Ghodhbane-Gtari, Faten, Beauchemin, Nicholas, Gueddou, Abdellatif, Hezbri, Karima, Ktari, Amir, Louati, Moussa, Nouioui, Imen, Chen, Amy, Huntemann, Marcel, Ivanova, Natalia, Kyrpides, Nikos, Markowitz, Victor, Mavrommatis, Kostas, Pagani, Ioanna, Sen, Arnab, Wall, Luis, Woyke, Tanja, Gtari, Maher, Tisa, Louis S.
Udgivet i Genome Announc (2016)

Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca

af Ghodhbane-Gtari, Faten, Beauchemin, Nicholas, Louati, Moussa, Nouioui, Imen, Ktari, Amir, Hezbri, Karima, Gueddou, Abdellatif, Chen, Amy, Huntemann, Marcel, Ivanova, Natalia, Kyrpides, Nikos, Markowitz, Victor, Mavrommatis, Kostas, Pagani, Ioanna, Sen, Arnab, Wall, Luis, Woyke, Tanja, Gtari, Maher, Tisa, Louis S.
Udgivet i Genome Announc (2016)

IMG/M 4 version of the integrated metagenome comparative analysis system

af Markowitz, Victor M., Chen, I-Min A., Chu, Ken, Szeto, Ernest, Palaniappan, Krishna, Pillay, Manoj, Ratner, Anna, Huang, Jinghua, Pagani, Ioanna, Tringe, Susannah, Huntemann, Marcel, Billis, Konstantinos, Varghese, Neha, Tennessen, Kristin, Mavromatis, Konstantinos, Pati, Amrita, Ivanova, Natalia N., Kyrpides, Nikos C.
Udgivet 2014

Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T))

af Anderson, Iain, Tindall, Brian J., Rohde, Manfred, Lucas, Susan, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Goodwin, Lynne, Pitluck, Sam, Peters, Lin, Pati, Amrita, Mikhailova, Natalia, Pagani, Ioanna, Teshima, Hazuki, Han, Cliff, Tapia, Roxanne, Land, Miriam, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos, Ivanova, Natalia
Udgivet 2012

Complete genome sequence of Dehalobacter restrictus PER-K23(T)

af Kruse, Thomas, Maillard, Julien, Goodwin, Lynne, Woyke, Tanja, Teshima, Hazuki, Bruce, David, Detter, Chris, Tapia, Roxanne, Han, Cliff, Huntemann, Marcel, Wei, Chia-Lin, Han, James, Chen, Amy, Kyrpides, Nikos, Szeto, Ernest, Markowitz, Victor, Ivanova, Natalia, Pagani, Ioanna, Pati, Amrita, Pitluck, Sam, Nolan, Matt, Holliger, Christof, Smidt, Hauke
Udgivet 2013

Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3)

af Kallimanis, Aristeidis, LaButti, Kurt M., Lapidus, Alla, Clum, Alicia, Lykidis, Athanasios, Mavromatis, Kostantinos, Pagani, Ioanna, Liolios, Konstantinos, Ivanova, Natalia, Goodwin, Lynne, Pitluck, Sam, Chen, Amy, Palaniappan, Krishna, Markowitz, Victor, Bristow, Jim, Velentzas, Athanasios D., Perisynakis, Angelos, Ouzounis, Christos C, Kyrpides, Nikos C., Koukkou, Anna I., Drainas, Constantin
Udgivet 2011

Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens

af Aylward, Frank O., Tremmel, Daniel M., Bruce, David C., Chain, Patrick, Chen, Amy, Walston Davenport, Karen, Detter, Chris, Han, Cliff S., Han, James, Huntemann, Marcel, Ivanova, Natalia N., Kyrpides, Nikos C., Markowitz, Victor, Mavrommatis, Kostas, Nolan, Matt, Pagani, Ioanna, Pati, Amrita, Pitluck, Sam, Deshpande, Shweta, Goodwin, Lynne, Woyke, Tanja, Currie, Cameron R.
Udgivet 2013

Complete genome sequence of Serratia plymuthica strain AS12

af Neupane, Saraswoti, Finlay, Roger D., Alström, Sadhna, Goodwin, Lynne, Kyrpides, Nikos C., Lucas, Susan, Lapidus, Alla, Bruce, David, Pitluck, Sam, Peters, Lin, Ovchinnikova, Galina, Chertkov, Olga, Han, James, Han, Cliff, Tapia, Roxanne, Detter, John C., Land, Miriam, Hauser, Loren, Cheng, Jan-Fang, Ivanova, Natalia, Pagani, Ioanna, Klenk, Hans-Peter, Woyke, Tanja, Högberg, Nils
Udgivet 2012

Complete Genome Sequence of the Thermophilic, Piezophilic, Heterotrophic Bacterium Marinitoga piezophila KA3

af Lucas, Susan, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Goodwin, Lynne A., Pitluck, Sam, Peters, Lin, Mikhailova, Natalia, Teshima, Hazuki, Detter, John C., Han, Cliff, Tapia, Roxanne, Land, Miriam, Hauser, Loren, Kyrpides, Nikos C., Ivanova, Natalia, Pagani, Ioanna, Vannier, Pauline, Oger, Phil, Bartlett, Douglas H., Noll, Kenneth M., Woyke, Tanja, Jebbar, Mohamed
Udgivet 2012

Complete genome sequence of the plant-associated Serratia plymuthica strain AS13

af Neupane, Saraswoti, Finlay, Roger D., Kyrpides, Nikos C., Goodwin, Lynne, Alström, Sadhna, Lucas, Susan, Land, Miriam, Han, James, Lapidus, Alla, Cheng, Jan-Fang, Bruce, David, Pitluck, Sam, Peters, Lin, Ovchinnikova, Galina, Held, Brittany, Han, Cliff, Detter, John C., Tapia, Roxanne, Hauser, Loren, Ivanova, Natalia, Pagani, Ioanna, Woyke, Tanja, Klenk, Hans-Peter, Högberg, Nils
Udgivet 2012

Genome Sequence of Streptomyces viridosporus Strain T7A ATCC 39115, a Lignin-Degrading Actinomycete

af Davis, Jennifer R., Goodwin, Lynne, Teshima, Hazuki, Detter, Chris, Tapia, Roxanne, Han, Cliff, Huntemann, Marcel, Wei, Chia-Lin, Han, James, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Kostas, Szeto, Ernest, Markowitz, Victor, Ivanova, Natalia, Mikhailova, Natalia, Ovchinnikova, Galina, Pagani, Ioanna, Pati, Amrita, Woyke, Tanja, Pitluck, Sam, Peters, Lin, Nolan, Matt, Land, Miriam, Sello, Jason K.
Udgivet 2013