Elucidating the digital control mechanism for DNA damage repair with the p53–Mdm2 system: single cell data analysis and ensemble modelling

Por Ogunnaike, Babatunde A
Publicado em 2005

Process dynamics, modeling, and control /

Por Ogunnaike, Babatunde A., Ray, W. Harmon
Publicado em 1994

Systems analysis of non-parenchymal cell modulation of liver repair across multiple regeneration modes

Por Cook, Daniel, Ogunnaike, Babatunde A., Vadigepalli, Rajanikanth
Publicado no BMC Syst Biol (2015)

A hybrid multiscale Monte Carlo algorithm (HyMSMC) to cope with disparity in time scales and species populations in intracellular networks

Por Samant, Asawari, Ogunnaike, Babatunde A, Vlachos, Dionisios G
Publicado em 2007

Probabilistic modeling and analysis of the effects of extra-cellular matrix density on the sizes, shapes, and locations of integrin clusters in adherent cells

Por Welf, Erik S, Naik, Ulhas P, Ogunnaike, Babatunde A
Publicado em 2011

A Spatial Model for Integrin Clustering as a Result of Feedback between Integrin Activation and Integrin Binding

Por Welf, Erik S., Naik, Ulhas P., Ogunnaike, Babatunde A.
Publicado em 2012

Identifying Functional Gene Regulatory Network Phenotypes Underlying Single Cell Transcriptional Variability

Por Park, James, Ogunnaike, Babatunde, Schwaber, James, Vadigepalli, Rajanikanth
Publicado no Prog Biophys Mol Biol (2014)

Robust dynamic balance of AP-1 transcription factors in a neuronal gene regulatory network

Por Miller, Gregory M, Ogunnaike, Babatunde A, Schwaber, James S, Vadigepalli, Rajanikanth
Publicado em 2010

Modeling the VPAC(2)-Activated cAMP/PKA Signaling Pathway: From Receptor to Circadian Clock Gene Induction

Por Hao, Haiping, Zak, Daniel E., Sauter, Thomas, Schwaber, James, Ogunnaike, Babatunde A.
Publicado em 2006

Computational modeling of Spatio-temporal Ca(2+) Signal Propagation along Hepatocyte Cords

Por Verma, Aalap, Makadia, Hirenkumar, Hoek, Jan B., Ogunnaike, Babatunde A., Vadigepalli, Rajanikanth
Publicado no IEEE Trans Biomed Eng (2016)

Cellular network modeling and single cell gene expression analysis reveals novel hepatic stellate cell phenotypes controlling liver regeneration dynamics

Por Cook, Daniel, Achanta, Sirisha, Hoek, Jan B., Ogunnaike, Babatunde A., Vadigepalli, Rajanikanth
Publicado no BMC Syst Biol (2018)

A control engineering approach to understanding the TGF-β paradox in cancer

Por Chung, Seung-Wook, Cooper, Carlton R., Farach-Carson, Mary C., Ogunnaike, Babatunde A.
Publicado em 2012

Controllability Analysis of Protein Glycosylation in Cho Cells

Por St. Amand, Melissa M., Tran, Kevin, Radhakrishnan, Devesh, Robinson, Anne S., Ogunnaike, Babatunde A.
Publicado em 2014

Causality Analysis and Cell Network Modeling of Spatial Calcium Signaling Patterns in Liver Lobules

Por Verma, Aalap, Antony, Anil Noronha, Ogunnaike, Babatunde A., Hoek, Jan B., Vadigepalli, Rajanikanth
Publicado no Front Physiol (2018)

Systems analysis of circadian time-dependent neuronal epidermal growth factor receptor signaling

Por Zak, Daniel E, Hao, Haiping, Vadigepalli, Rajanikanth, Miller, Gregory M, Ogunnaike, Babatunde A, Schwaber, James S
Publicado em 2006

Quantifying gene network connectivity in silico: Scalability and accuracy of a modular approach

Por Yalamanchili, Nirupama, Zak, Daniel E., Ogunnaike, Babatunde A., Schwaber, James S., Kriete, Andres, Kholodenko, Boris N.
Publicado em 2006

Ligand-dependent responses of the ErbB signaling network: experimental and modeling analyses

Por Birtwistle, Marc R, Hatakeyama, Mariko, Yumoto, Noriko, Ogunnaike, Babatunde A, Hoek, Jan B, Kholodenko, Boris N
Publicado em 2007

Inputs drive cell phenotype variability

Por Park, James, Brureau, Anthony, Kernan, Kate, Starks, Alexandria, Gulati, Sonali, Ogunnaike, Babatunde, Schwaber, James, Vadigepalli, Rajanikanth
Publicado em 2014

Adiponectin fine-tuning of liver regeneration dynamics revealed through cellular network modelling

Por Correnti, Jason M, Cook, Daniel, Aksamitiene, Edita, Swarup, Aditi, Ogunnaike, Babatunde, Vadigepalli, Rajanikanth, Hoek, Jan B
Publicado no J Physiol (2015)

Single-Cell Transcriptional Analysis Reveals Novel Neuronal Phenotypes and Interaction Networks Involved in the Central Circadian Clock

Por Park, James, Zhu, Haisun, O'Sullivan, Sean, Ogunnaike, Babatunde A., Weaver, David R., Schwaber, James S., Vadigepalli, Rajanikanth
Publicado no Front Neurosci (2016)