GATA: a graphic alignment tool for comparative sequence analysis

por Nix David A, Eisen Michael B
Publicado 2005-01-01

GATA: a graphic alignment tool for comparative sequence analysis

por Nix, David A, Eisen, Michael B
Publicado 2005

Nuclear–Cytoplasmic Shuttling of the Focal Contact Protein, Zyxin: A Potential Mechanism for Communication between Sites of Cell Adhesion and the Nucleus

por Nix, David A., Beckerle, Mary C.
Publicado 1997

Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks

por Nix, David A, Courdy, Samir J, Boucher, Kenneth M
Publicado 2008

Viral miRNA adaptor differentially recruits miRNAs to target mRNAs through alternative base-pairing

por Gorbea, Carlos, Mosbruger, Tim, Nix, David A, Cazalla, Demián
Publicado en eLife (2019)

Germline epigenetics, and reprogramming in zebrafish early embryos

por Potok, Magdalena E, Nix, David A, Parnell, Timothy J, Cairns, Bradley R
Publicado 2013

Reprogramming the Maternal Zebrafish Genome after Fertilization to Match the Paternal Methylation Pattern

por Potok, Magdalena E., Nix, David A., Parnell, Timothy J., Cairns, Bradley R.
Publicado 2013

Flexible promoter architecture requirements for coactivator recruitment

por Chiang, Derek Y, Nix, David A, Shultzaberger, Ryan K, Gasch, Audrey P, Eisen, Michael B
Publicado 2006

Distinctive Chromatin in Human Sperm Packages Genes for Embryo Development

por Hammoud, Saher Sue, Nix, David A., Zhang, Haiying, Purwar, Jahnvi, Carrell, Douglas T., Cairns, Bradley R.
Publicado 2009

Genome-wide analysis identifies changes in histone retention and epigenetic modifications at developmental and imprinted gene loci in the sperm of infertile men

por Hammoud, Saher Sue, Nix, David A., Hammoud, Ahmad O., Gibson, Mark, Cairns, Bradley R., Carrell, Douglas T.
Publicado 2011

Potential role for snoRNAs in PKR activation during metabolic stress

por Youssef, Osama A., Safran, Sarah A., Nakamura, Takahisa, Nix, David A., Hotamisligil, Gökhan S., Bass, Brenda L.
Publicado en Proc Natl Acad Sci U S A (2015)

Dicer's helicase domain is required for accumulation of some, but not all, C. elegans endogenous siRNAs

por Welker, Noah C., Pavelec, Derek M., Nix, David A., Duchaine, Thomas F., Kennedy, Scott, Bass, Brenda L.
Publicado 2010

Adenomatous polyposis coli protein contains two nuclear export signals and shuttles between the nucleus and cytoplasm

por Neufeld, Kristi L., Nix, David A., Bogerd, Hal, Kang, Yibin, Beckerle, Mary C., Cullen, Bryan R., White, Raymond L.
Publicado 2000

Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping

por Dutrow, Natalie, Nix, David A, Holt, Derick, Milash, Brett, Dalley, Brian, Westbroek, Erick, Parnell, Timothy J, Cairns, Bradley R
Publicado 2008

Comprehensive identification of Drosophila dorsal–ventral patterning genes using a whole-genome tiling array

por Biemar, Frédéric, Nix, David A., Piel, Jessica, Peterson, Brant, Ronshaugen, Matthew, Sementchenko, Victor, Bell, Ian, Manak, J. Robert, Levine, Michael S.
Publicado 2006

Genome-wide profiling of the C. elegans dsRNAome

por Whipple, Joseph M., Youssef, Osama A., Aruscavage, P. Joseph, Nix, David A., Hong, Changjin, Johnson, W. Evan, Bass, Brenda L.
Publicado en RNA (2015)

Large-Scale Turnover of Functional Transcription Factor Binding Sites in Drosophila

por Moses, Alan M, Pollard, Daniel A, Nix, David A, Iyer, Venky N, Li, Xiao-Yong, Biggin, Mark D, Eisen, Michael B
Publicado 2006

Next generation tools for genomic data generation, distribution, and visualization

por Nix, David A, Di Sera, Tonya L, Dalley, Brian K, Milash, Brett A, Cundick, Robert M, Quinn, Kevin S, Courdy, Samir J
Publicado 2010

ENCODE Tiling Array Analysis Identifies Differentially Expressed Annotated and Novel 5′ Capped RNAs in Hepatitis C Infected Liver

por Folkers, Milan E., Delker, Don A., Maxwell, Christopher I., Nelson, Cassie A., Schwartz, Jason J., Nix, David A., Hagedorn, Curt H.
Publicado 2011

Genome-wide RNA-seq analysis of human and mouse platelet transcriptomes

por Rowley, Jesse W., Oler, Andrew J., Tolley, Neal D., Hunter, Benjamin N., Low, Elizabeth N., Nix, David A., Yost, Christian C., Zimmerman, Guy A., Weyrich, Andrew S.
Publicado 2011