GATA: a graphic alignment tool for comparative sequence analysis

Autor Nix David A, Eisen Michael B
Vydáno 2005-01-01

GATA: a graphic alignment tool for comparative sequence analysis

Autor Nix, David A, Eisen, Michael B
Vydáno 2005

Nuclear–Cytoplasmic Shuttling of the Focal Contact Protein, Zyxin: A Potential Mechanism for Communication between Sites of Cell Adhesion and the Nucleus

Autor Nix, David A., Beckerle, Mary C.
Vydáno 1997

Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks

Autor Nix, David A, Courdy, Samir J, Boucher, Kenneth M
Vydáno 2008

Viral miRNA adaptor differentially recruits miRNAs to target mRNAs through alternative base-pairing

Autor Gorbea, Carlos, Mosbruger, Tim, Nix, David A, Cazalla, Demián
Vydáno v eLife (2019)

Germline epigenetics, and reprogramming in zebrafish early embryos

Autor Potok, Magdalena E, Nix, David A, Parnell, Timothy J, Cairns, Bradley R
Vydáno 2013

Reprogramming the Maternal Zebrafish Genome after Fertilization to Match the Paternal Methylation Pattern

Autor Potok, Magdalena E., Nix, David A., Parnell, Timothy J., Cairns, Bradley R.
Vydáno 2013

Flexible promoter architecture requirements for coactivator recruitment

Autor Chiang, Derek Y, Nix, David A, Shultzaberger, Ryan K, Gasch, Audrey P, Eisen, Michael B
Vydáno 2006

Distinctive Chromatin in Human Sperm Packages Genes for Embryo Development

Autor Hammoud, Saher Sue, Nix, David A., Zhang, Haiying, Purwar, Jahnvi, Carrell, Douglas T., Cairns, Bradley R.
Vydáno 2009

Genome-wide analysis identifies changes in histone retention and epigenetic modifications at developmental and imprinted gene loci in the sperm of infertile men

Autor Hammoud, Saher Sue, Nix, David A., Hammoud, Ahmad O., Gibson, Mark, Cairns, Bradley R., Carrell, Douglas T.
Vydáno 2011

Potential role for snoRNAs in PKR activation during metabolic stress

Autor Youssef, Osama A., Safran, Sarah A., Nakamura, Takahisa, Nix, David A., Hotamisligil, Gökhan S., Bass, Brenda L.
Vydáno v Proc Natl Acad Sci U S A (2015)

Dicer's helicase domain is required for accumulation of some, but not all, C. elegans endogenous siRNAs

Autor Welker, Noah C., Pavelec, Derek M., Nix, David A., Duchaine, Thomas F., Kennedy, Scott, Bass, Brenda L.
Vydáno 2010

Adenomatous polyposis coli protein contains two nuclear export signals and shuttles between the nucleus and cytoplasm

Autor Neufeld, Kristi L., Nix, David A., Bogerd, Hal, Kang, Yibin, Beckerle, Mary C., Cullen, Bryan R., White, Raymond L.
Vydáno 2000

Dynamic transcriptome of Schizosaccharomyces pombe shown by RNA-DNA hybrid mapping

Autor Dutrow, Natalie, Nix, David A, Holt, Derick, Milash, Brett, Dalley, Brian, Westbroek, Erick, Parnell, Timothy J, Cairns, Bradley R
Vydáno 2008

Comprehensive identification of Drosophila dorsal–ventral patterning genes using a whole-genome tiling array

Autor Biemar, Frédéric, Nix, David A., Piel, Jessica, Peterson, Brant, Ronshaugen, Matthew, Sementchenko, Victor, Bell, Ian, Manak, J. Robert, Levine, Michael S.
Vydáno 2006

Genome-wide profiling of the C. elegans dsRNAome

Autor Whipple, Joseph M., Youssef, Osama A., Aruscavage, P. Joseph, Nix, David A., Hong, Changjin, Johnson, W. Evan, Bass, Brenda L.
Vydáno v RNA (2015)

Large-Scale Turnover of Functional Transcription Factor Binding Sites in Drosophila

Autor Moses, Alan M, Pollard, Daniel A, Nix, David A, Iyer, Venky N, Li, Xiao-Yong, Biggin, Mark D, Eisen, Michael B
Vydáno 2006

Next generation tools for genomic data generation, distribution, and visualization

Autor Nix, David A, Di Sera, Tonya L, Dalley, Brian K, Milash, Brett A, Cundick, Robert M, Quinn, Kevin S, Courdy, Samir J
Vydáno 2010

ENCODE Tiling Array Analysis Identifies Differentially Expressed Annotated and Novel 5′ Capped RNAs in Hepatitis C Infected Liver

Autor Folkers, Milan E., Delker, Don A., Maxwell, Christopher I., Nelson, Cassie A., Schwartz, Jason J., Nix, David A., Hagedorn, Curt H.
Vydáno 2011

Genome-wide RNA-seq analysis of human and mouse platelet transcriptomes

Autor Rowley, Jesse W., Oler, Andrew J., Tolley, Neal D., Hunter, Benjamin N., Low, Elizabeth N., Nix, David A., Yost, Christian C., Zimmerman, Guy A., Weyrich, Andrew S.
Vydáno 2011