Interpreting the regulatory genome: the genomics of transcription factor function in Drosophila melanogaster

Por Slattery, Matthew, Nègre, Nicolas, White, Kevin P.
Publicado em 2012

Genomic data integration for ecological and evolutionary traits in non-model organisms

Por Tagu, Denis, Colbourne, John K, Nègre, Nicolas
Publicado em 2014

Genome-Wide Tissue-Specific Occupancy of the Hox Protein Ultrabithorax and Hox Cofactor Homothorax in Drosophila

Por Slattery, Matthew, Ma, Lijia, Négre, Nicolas, White, Kevin P., Mann, Richard S.
Publicado em 2011

Divergent Transcriptional Regulatory Logic at the Intersection of Tissue Growth and Developmental Patterning

Por Slattery, Matthew, Voutev, Roumen, Ma, Lijia, Nègre, Nicolas, White, Kevin P., Mann, Richard S.
Publicado em 2013

Spodoptera frugiperda transcriptional response to infestation by Steinernema carpocapsae

Por Huot, Louise, George, Simon, Girard, Pierre-Alain, Severac, Dany, Nègre, Nicolas, Duvic, Bernard
Publicado no Sci Rep (2019)

Positive selection alone is sufficient for whole genome differentiation at the early stage of speciation process in the fall armyworm

Por Nam, Kiwoong, Nhim, Sandra, Robin, Stéphanie, Bretaudeau, Anthony, Nègre, Nicolas, d’Alençon, Emmanuelle
Publicado no BMC Evol Biol (2020)

Adaptive Evolution and the Birth of CTCF Binding Sites in the Drosophila Genome

Por Ni, Xiaochun, Zhang, Yong E., Nègre, Nicolas, Chen, Sidi, Long, Manyuan, White, Kevin P.
Publicado em 2012

Determinants of antigenicity and specificity in immune response for protein sequences

Por Wang, Yulong, Wu, Wenjun, Negre, Nicolas N, White, Kevin P, Li, Cheng, Shah, Parantu K
Publicado em 2011

Insensitive is a corepressor for Suppressor of Hairless and regulates Notch signalling during neural development

Por Duan, Hong, Dai, Qi, Kavaler, Joshua, Bejarano, Fernando, Medranda, Giorgio, Nègre, Nicolas, Lai, Eric C
Publicado em 2011

Chromosomal Distribution of PcG Proteins during Drosophila Development

Por Nègre, Nicolas, Hennetin, Jérôme, Sun, Ling V, Lavrov, Sergey, Bellis, Michel, White, Kevin P, Cavalli, Giacomo
Publicado em 2006

ChIP-chip versus ChIP-seq: Lessons for experimental design and data analysis

Por Ho, Joshua WK, Bishop, Eric, Karchenko, Peter V, Nègre, Nicolas, White, Kevin P, Park, Peter J
Publicado em 2011

Evidence for Autoregulation and Cell Signaling Pathway Regulation From Genome-Wide Binding of the Drosophila Retinoblastoma Protein

Por Acharya, Pankaj, Negre, Nicolas, Johnston, John, Wei, Yiliang, White, Kevin P., Henry, R. William, Arnosti, David N.
Publicado em 2012

Evolution of H3K27me3-marked chromatin is linked to gene expression evolution and to patterns of gene duplication and diversification

Por Arthur, Robert K., Ma, Lijia, Slattery, Matthew, Spokony, Rebecca F., Ostapenko, Alexander, Nègre, Nicolas, White, Kevin P.
Publicado em 2014

Characterization and expression profiling of microRNAs in response to plant feeding in two host-plant strains of the lepidopteran pest Spodoptera frugiperda

Por Moné, Yves, Nhim, Sandra, Gimenez, Sylvie, Legeai, Fabrice, Seninet, Imène, Parrinello, Hugues, Nègre, Nicolas, d’Alençon, Emmanuelle
Publicado no BMC Genomics (2018)

Evidence of abundant stop codon readthrough in Drosophila and other metazoa

Por Jungreis, Irwin, Lin, Michael F., Spokony, Rebecca, Chan, Clara S., Negre, Nicolas, Victorsen, Alec, White, Kevin P., Kellis, Manolis
Publicado em 2011

Flynet: a genomic resource for Drosophila melanogaster transcriptional regulatory networks

Por Tian, Feng, Shah, Parantu K., Liu, Xiangjun, Negre, Nicolas, Chen, Jia, Karpenko, Oleksiy, White, Kevin P., Grossman, Robert L.
Publicado em 2009

Protein–DNA interaction mapping using genomic tiling path microarrays in Drosophila

Por Sun, Ling V., Chen, Liang, Greil, Frauke, Negre, Nicolas, Li, Tong-Ruei, Cavalli, Giacomo, Zhao, Hongyu, van Steensel, Bas, White, Kevin P.
Publicado em 2003

Control of mitochondrial structure and function by the Yorkie/YAP oncogenic pathway

Por Nagaraj, Raghavendra, Gururaja-Rao, Shubha, Jones, Kevin T., Slattery, Matthew, Negre, Nicolas, Braas, Daniel, Christofk, Heather, White, Kevin P., Mann, Richard, Banerjee, Utpal
Publicado em 2012

The Relationship Between Long-Range Chromatin Occupancy and Polymerization of the Drosophila ETS Family Transcriptional Repressor Yan

Por Webber, Jemma L., Zhang, Jie, Cote, Lauren, Vivekanand, Pavithra, Ni, Xiaochun, Zhou, Jie, Nègre, Nicolas, Carthew, Richard W., White, Kevin P., Rebay, Ilaria
Publicado em 2013

Chromatin Insulator Factors Involved in Long-Range DNA Interactions and Their Role in the Folding of the Drosophila Genome

Por Vogelmann, Jutta, Le Gall, Antoine, Dejardin, Stephanie, Allemand, Frederic, Gamot, Adrien, Labesse, Gilles, Cuvier, Olivier, Nègre, Nicolas, Cohen-Gonsaud, Martin, Margeat, Emmanuel, Nöllmann, Marcelo
Publicado em 2014