PASBio: predicate-argument structures for event extraction in molecular biology

по Shah Parantu K, Wattarujeekrit Tuangthong, Collier Nigel
Опубликовано 2004-10-01

PASBio: predicate-argument structures for event extraction in molecular biology

по Wattarujeekrit, Tuangthong, Shah, Parantu K, Collier, Nigel
Опубликовано 2004

Lessons from a decade of integrating cancer copy number alterations with gene expression profiles

по Huang, Norman, Shah, Parantu K., Li, Cheng
Опубликовано 2012

Editorial

по Wiznerowicz, Maciej, Shah, Parantu K, Andersen, Jannik N.
Опубликовано в: Contemp Oncol (Pozn) (2015)

Extraction of Transcript Diversity from Scientific Literature

по Shah, Parantu K, Jensen, Lars J, Boué, Stéphanie, Bork, Peer
Опубликовано 2005

Structural similarity to bridge sequence space: Finding new families on the bridges

по Shah, Parantu K., Aloy, Patrick, Bork, Peer, Russell, Robert B.
Опубликовано 2005

Information extraction from full text scientific articles: Where are the keywords?

по Shah, Parantu K, Perez-Iratxeta, Carolina, Bork, Peer, Andrade, Miguel A
Опубликовано 2003

Computational characterisation of cancer molecular profiles derived using next generation sequencing

по Oleksiewicz, Urszula, Tomczak, Katarzyna, Woropaj, Jakub, Markowska, Monika, Stępniak, Piotr, Shah, Parantu K
Опубликовано в: Contemp Oncol (Pozn) (2015)

Determinants of antigenicity and specificity in immune response for protein sequences

по Wang, Yulong, Wu, Wenjun, Negre, Nicolas N, White, Kevin P, Li, Cheng, Shah, Parantu K
Опубликовано 2011

canEvolve: A Web Portal for Integrative Oncogenomics

по Samur, Mehmet Kemal, Yan, Zhenyu, Wang, Xujun, Cao, Qingyi, Munshi, Nikhil C., Li, Cheng, Shah, Parantu K.
Опубликовано 2013

Cross-talk between chromatin acetylation and SUMOylation of tripartite motif–containing protein 24 (TRIM24) impacts cell adhesion

по Appikonda, Srikanth, Thakkar, Kaushik N., Shah, Parantu K., Dent, Sharon Y.R., Andersen, Jannik N., Barton, Michelle C.
Опубликовано в: J Biol Chem (2018)

Flynet: a genomic resource for Drosophila melanogaster transcriptional regulatory networks

по Tian, Feng, Shah, Parantu K., Liu, Xiangjun, Negre, Nicolas, Chen, Jia, Karpenko, Oleksiy, White, Kevin P., Grossman, Robert L.
Опубликовано 2009

The dChip survival analysis module for microarray data

по Amin, Samir B, Shah, Parantu K, Yan, Aimin, Adamia, Sophia, Minvielle, Stéphane, Avet-Loiseau, Hervé, Munshi, Nikhil C, Li, Cheng
Опубликовано 2011

The shaping and functional consequences of the dosage effect landscape in multiple myeloma

по Samur, Mehmet K, Shah, Parantu K, Wang, Xujun, Minvielle, Stéphane, Magrangeas, Florence, Avet-Loiseau, Hervé, Munshi, Nikhil C, Li, Cheng
Опубликовано 2013

Integrative analysis of gene and miRNA expression profiles with transcription factor–miRNA feed-forward loops identifies regulators in human cancers

по Yan, Zhenyu, Shah, Parantu K., Amin, Samir B., Samur, Mehmet K., Huang, Norman, Wang, Xujun, Misra, Vikas, Ji, Hongbin, Gabuzda, Dana, Li, Cheng
Опубликовано 2012

Transcription factor-pathway co-expression analysis reveals cooperation between SP1 and ESR1 on dysregulating cell cycle arrest in non-hyperdiploid multiple myeloma

по Wang, Xujun, Yan, Zhenyu, Fulciniti, Mariateresa, Li, Yingxiang, Gkotzamanidou, Maria, Amin, Samir B, Shah, Parantu K, Zhang, Yong, Munshi, Nikhil C, Li, Cheng
Опубликовано 2013

Classify Hyperdiploidy Status of Multiple Myeloma Patients Using Gene Expression Profiles

по Li, Yingxiang, Wang, Xujun, Zheng, Haiyang, Wang, Chengyang, Minvielle, Stéphane, Magrangeas, Florence, Avet-Loiseau, Hervé, Shah, Parantu K., Zhang, Yong, Munshi, Nikhil C., Li, Cheng
Опубликовано 2013

TRIM28 multi-domain protein regulates cancer stem cell population in breast tumor development

по Czerwińska, Patrycja, Shah, Parantu K., Tomczak, Katarzyna, Klimczak, Marta, Mazurek, Sylwia, Sozańska, Barbara, Biecek, Przemysław, Korski, Konstanty, Filas, Violetta, Mackiewicz, Andrzej, Andersen, Jannik N., Wiznerowicz, Maciej
Опубликовано в: Oncotarget (2016)

TRIM24 Links Glucose Metabolism with Transformation of Human Mammary Epithelial Cells

по Pathiraja, Thushangi N., Thakkar, Kaushik N., Jiang, Shiming, Stratton, Sabrina, Liu, Zhaoliang, Gagea, Mihai, Xi, Shi, Shah, Parantu K., Phan, Liem, Lee, Mong-Hong, Andersen, Jannik, Stampfer, Martha, Barton, Michelle C.
Опубликовано в: Oncogene (2014)

A Comprehensive Map of Insulator Elements for the Drosophila Genome

по Nègre, Nicolas, Brown, Christopher D., Shah, Parantu K., Kheradpour, Pouya, Morrison, Carolyn A., Henikoff, Jorja G., Feng, Xin, Ahmad, Kami, Russell, Steven, White, Robert A. H., Stein, Lincoln, Henikoff, Steven, Kellis, Manolis, White, Kevin P.
Опубликовано 2010