HIV Whole-Genome Sequencing Now: Answering Still-Open Questions

Por Metzner, Karin J.
Publicado no J Clin Microbiol (2016)

Convergent evolution as an indicator for selection during acute HIV-1 infection

Por Bertels, Frederic, Metzner, Karin J., Regoes, Roland
Publicado em 2021-11-01

Challenges and opportunities in estimating viral genetic diversity from next-generation sequencing data

Por Beerenwinkel, Niko, Günthard, Huldrych F., Roth, Volker, Metzner, Karin J.
Publicado em 2012

A Framework for Inferring Fitness Landscapes of Patient-Derived Viruses Using Quasispecies Theory

Por Seifert, David, Di Giallonardo, Francesca, Metzner, Karin J., Günthard, Huldrych F., Beerenwinkel, Niko
Publicado no Genetics (2015)

Tenofovir treatment augments anti-viral immunity against drug-resistant SIV challenge in chronically infected rhesus macaques

Por Metzner, Karin J, Binley, James M, Gettie, Agegnehu, Marx, Preston, Nixon, Douglas F, Connor, Ruth I
Publicado em 2006

Minority K65R Variants and Early Failure of Antiretroviral Therapy in HIV-1–infected Eritrean Immigrant

Por Bansal, Vineeta, Metzner, Karin J., Niederöst, Barbara, Leemann, Christine, Böni, Jürg, Günthard, Huldrych F., Fehr, Jan S.
Publicado em 2011

A Truncated Form of Nef Selected during Pathogenic Reversion of Simian Immunodeficiency Virus SIVmac239Δnef Increases Viral Replication

Por Chakrabarti, Lisa A., Metzner, Karin J., Ivanovic, Tijana, Cheng, Hua, Louis-Virelizier, Jean, Connor, Ruth I., Cheng-Mayer, Cecilia
Publicado em 2003

HIV-1 RNAs are Not Part of the Argonaute 2 Associated RNA Interference Pathway in Macrophages

Por Vongrad, Valentina, Imig, Jochen, Mohammadi, Pejman, Kishore, Shivendra, Jaskiewicz, Lukasz, Hall, Jonathan, Günthard, Huldrych F., Beerenwinkel, Niko, Metzner, Karin J.
Publicado no PLoS One (2015)

Monocyte-derived macrophages exhibit distinct and more restricted HIV-1 integration site repertoire than CD4(+) T cells

Por Kok, Yik Lim, Vongrad, Valentina, Shilaih, Mohaned, Di Giallonardo, Francesca, Kuster, Herbert, Kouyos, Roger, Günthard, Huldrych F., Metzner, Karin J.
Publicado no Sci Rep (2016)

Reply to correspondence ‘Conserved signatures indicate HIV-1 transmission is under strong selection and thus is not a “stochastic” process’ by Gonzalez et al., Retrovirology 2017...

Por Oberle, Corinna S., Magnus, Carsten, Joos, Beda, Rusert, Peter, Beauparlant, David, Kouyos, Roger, Trkola, Alexandra, Metzner, Karin J., Günthard, Huldrych F.
Publicado no Retrovirology (2017)

Synthetic pre-microRNAs reveal dual-strand activity of miR-34a on TNF-α

Por Guennewig, Boris, Roos, Martina, Dogar, Afzal M., Gebert, Luca F.R., Zagalak, Julian A., Vongrad, Valentina, Metzner, Karin J., Hall, Jonathan
Publicado em 2014

Optimization and validation of sample preparation for metagenomic sequencing of viruses in clinical samples

Por Lewandowska, Dagmara W., Zagordi, Osvaldo, Geissberger, Fabienne-Desirée, Kufner, Verena, Schmutz, Stefan, Böni, Jürg, Metzner, Karin J., Trkola, Alexandra, Huber, Michael
Publicado no Microbiome (2017)

Correction to: Optimization and validation of sample preparation for metagenomic sequencing of viruses in clinical samples

Por Lewandowska, Dagmara W., Zagordi, Osvaldo, Geissberger, Fabienne-Desirée, Kufner, Verena, Schmutz, Stefan, Böni, Jürg, Metzner, Karin J., Trkola, Alexandra, Huber, Michael
Publicado no Microbiome (2017)

Reappearance of Minority K103N HIV-1 Variants after Interruption of ART Initiated during Primary HIV-1 Infection

Por Metzner, Karin J., Leemann, Christine, Di Giallonardo, Francesca, Grube, Christina, Scherrer, Alexandra U., Braun, Dominique, Kuster, Herbert, Weber, Rainer, Guenthard, Huldrych F.
Publicado em 2011

In Vivo and in Vitro Proteome Analysis of Human Immunodeficiency Virus (HIV)-1-infected, Human CD4(+) T Cells

Por Nemeth, Johannes, Vongrad, Valentina, Metzner, Karin J., Strouvelle, Victoria P., Weber, Rainer, Pedrioli, Patrick, Aebersold, Ruedi, Günthard, Huldrych F., Collins, Ben C.
Publicado no Mol Cell Proteomics (2017)

Next-Generation Sequencing of HIV-1 RNA Genomes: Determination of Error Rates and Minimizing Artificial Recombination

Por Di Giallonardo, Francesca, Zagordi, Osvaldo, Duport, Yannick, Leemann, Christine, Joos, Beda, Künzli-Gontarczyk, Marzanna, Bruggmann, Rémy, Beerenwinkel, Niko, Günthard, Huldrych F., Metzner, Karin J.
Publicado em 2013

Tailored enrichment strategy detects low abundant small noncoding RNAs in HIV-1 infected cells

Por Althaus, Claudia F, Vongrad, Valentina, Niederöst, Barbara, Joos, Beda, Di Giallonardo, Francesca, Rieder, Philip, Pavlovic, Jovan, Trkola, Alexandra, Günthard, Huldrych F, Metzner, Karin J, Fischer, Marek
Publicado em 2012

A Lead-In with Silibinin Prior to Triple-Therapy Translates into Favorable Treatment Outcomes in Difficult-To-Treat HIV/Hepatitis C Coinfected Patients

Por Braun, Dominique L., Rauch, Andri, Aouri, Manel, Durisch, Nina, Eberhard, Nadia, Anagnostopoulos, Alexia, Ledergerber, Bruno, Müllhaupt, Beat, Metzner, Karin J., Decosterd, Laurent, Böni, Jürg, Weber, Rainer, Fehr, Jan
Publicado no PLoS One (2015)

Spontaneous reactivation of latent HIV-1 promoters is linked to the cell cycle as revealed by a genetic-insulators-containing dual-fluorescence HIV-1-based vector

Por Kok, Yik Lim, Schmutz, Stefan, Inderbitzin, Anne, Neumann, Kathrin, Kelley, Audrey, Jörimann, Lisa, Shilaih, Mohaned, Vongrad, Valentina, Kouyos, Roger D., Günthard, Huldrych F., Berens, Christian, Metzner, Karin J.
Publicado no Sci Rep (2018)

A suicide gene approach using the human pro-apoptotic protein tBid inhibits HIV-1 replication

Por Gueckel Eva, Danke Christina, Di Giallonardo Francesca, Rauch Pia, Popp Jasmin, Knoepfel Stefanie A, Hofmann Andreas D, Huelsmann Peter M, Schambach Axel, Wolff Horst, Metzner Karin J, Berens Christian
Publicado em 2011-01-01