OrthoInspector: comprehensive orthology analysis and visual exploration

by Lecompte Odile, Poch Olivier, Thompson Julie D, Linard Benjamin
Published 2011-01-01

OrthoInspector: comprehensive orthology analysis and visual exploration

by Linard, Benjamin, Thompson, Julie D, Poch, Olivier, Lecompte, Odile
Published 2011

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

by Thompson, Julie D., Linard, Benjamin, Lecompte, Odile, Poch, Olivier
Published 2011

Controversies in modern evolutionary biology: the imperative for error detection and quality control

by Prosdocimi, Francisco, Linard, Benjamin, Pontarotti, Pierre, Poch, Olivier, Thompson, Julie D
Published 2012

Rapid screening and detection of inter-type viral recombinants using phylo-k-mers

by Scholz, Guillaume E, Linard, Benjamin, Romashchenko, Nikolai, Rivals, Eric, Pardi, Fabio
Published in Bioinformatics (2020)

EvoluCode: Evolutionary Barcodes as a Unifying Framework for Multilevel Evolutionary Data

by Linard, Benjamin, Nguyen, Ngoc Hoan, Prosdocimi, Francisco, Poch, Olivier, Thompson, Julie D.
Published 2011

New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing

by Andújar, Carmelo, Arribas, Paula, Motyka, Michal, Bocek, Mathew, Bocak, Ladislav, Linard, Benjamin, Vogler, Alfried P.
Published in Mitochondrial DNA B Resour (2019)

Metagenome Skimming of Insect Specimen Pools: Potential for Comparative Genomics

by Linard, Benjamin, Crampton-Platt, Alex, Gillett, Conrad P.D.T., Timmermans, Martijn J.T.N., Vogler, Alfried P.
Published in Genome Biol Evol (2015)

OrthoInspector 3.0: open portal for comparative genomics

by Nevers, Yannis, Kress, Arnaud, Defosset, Audrey, Ripp, Raymond, Linard, Benjamin, Thompson, Julie D, Poch, Olivier, Lecompte, Odile
Published in Nucleic Acids Res (2019)

Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents

by Paula, Débora P., Linard, Benjamin, Crampton-Platt, Alex, Srivathsan, Amrita, Timmermans, Martijn J. T. N., Sujii, Edison R., Pires, Carmen S. S., Souza, Lucas M., Andow, David A., Vogler, Alfried P.
Published in PLoS One (2016)

Ten Years of Collaborative Progress in the Quest for Orthologs

by Linard, Benjamin, Ebersberger, Ingo, McGlynn, Shawn E, Glover, Natasha, Mochizuki, Tomohiro, Patricio, Mateus, Lecompte, Odile, Nevers, Yannis, Thomas, Paul D, Gabaldón, Toni, Sonnhammer, Erik, Dessimoz, Christophe, Uchiyama, Ikuo
Published in Mol Biol Evol (2021)

KD4v: comprehensible knowledge discovery system for missense variant

by Luu, Tien-Dao, Rusu, Alin, Walter, Vincent, Linard, Benjamin, Poidevin, Laetitia, Ripp, Raymond, Moulinier, Luc, Muller, Jean, Raffelsberger, Wolfgang, Wicker, Nicolas, Lecompte, Odile, Thompson, Julie D., Poch, Olivier, Nguyen, Hoan
Published 2012

Standardized benchmarking in the quest for orthologs

by Altenhoff, Adrian M, Boeckmann, Brigitte, Capella-Gutierrez, Salvador, Dalquen, Daniel A, DeLuca, Todd, Forslund, Kristoffer, Huerta-Cepas, Jaime, Linard, Benjamin, Pereira, Cécile, Pryszcz, Leszek P, Schreiber, Fabian, da Silva, Alan Sousa, Szklarczyk, Damian, Train, Clément-Marie, Bork, Peer, Lecompte, Odile, von Mering, Christian, Xenarios, Ioannis, Sjölander, Kimmen, Jensen, Lars Juhl, Martin, Maria J, Muffato, Matthieu, Gabaldón, Toni, Lewis, Suzanna E, Thomas, Paul D, Sonnhammer, Erik, Dessimoz, Christophe
Published in Nat Methods (2016)

Toward community standards in the quest for orthologs

by Dessimoz, Christophe, Gabaldón, Toni, Roos, David S., Sonnhammer, Erik L. L., Herrero, Javier, Altenhoff, Adrian, Apweiler, Rolf, Ashburner, Michael, Blake, Judith, Boeckmann, Brigitte, Bridge, Alan, Bruford, Elspeth, Cherry, Mike, Conte, Matthieu, Dannie, Durand, Datta, Ruchira, Dessimoz, Christophe, Domelevo Entfellner, Jean-Baka, Ebersberger, Ingo, Gabaldón, Toni, Galperin, Michael, Herrero, Javier, Joseph, Jacob, Koestler, Tina, Kriventseva, Evgenia, Lecompte, Odile, Leunissen, Jack, Lewis, Suzanna, Linard, Benjamin, Livstone, Michael S., Lu, Hui-Chun, Martin, Maria, Mazumder, Raja, Messina, David, Miele, Vincent, Muffato, Matthieu, Perrière, Guy, Punta, Marco, Roos, David, Rouard, Mathieu, Schmitt, Thomas, Schreiber, Fabian, Silva, Alan, Sjölander, Kimmen, Škunca, Nives, Sonnhammer, Erik, Stanley, Eleanor, Szklarczyk, Radek, Thomas, Paul, Uchiyama, Ikuo, Van Bel, Michiel, Vandepoele, Klaas, Vilella, Albert J., Yates, Andrew, Zdobnov, Evgeny
Published 2012