OrthoInspector: comprehensive orthology analysis and visual exploration

Autor Lecompte Odile, Poch Olivier, Thompson Julie D, Linard Benjamin
Vydáno 2011-01-01

OrthoInspector: comprehensive orthology analysis and visual exploration

Autor Linard, Benjamin, Thompson, Julie D, Poch, Olivier, Lecompte, Odile
Vydáno 2011

A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives

Autor Thompson, Julie D., Linard, Benjamin, Lecompte, Odile, Poch, Olivier
Vydáno 2011

Controversies in modern evolutionary biology: the imperative for error detection and quality control

Autor Prosdocimi, Francisco, Linard, Benjamin, Pontarotti, Pierre, Poch, Olivier, Thompson, Julie D
Vydáno 2012

Rapid screening and detection of inter-type viral recombinants using phylo-k-mers

Autor Scholz, Guillaume E, Linard, Benjamin, Romashchenko, Nikolai, Rivals, Eric, Pardi, Fabio
Vydáno v Bioinformatics (2020)

EvoluCode: Evolutionary Barcodes as a Unifying Framework for Multilevel Evolutionary Data

Autor Linard, Benjamin, Nguyen, Ngoc Hoan, Prosdocimi, Francisco, Poch, Olivier, Thompson, Julie D.
Vydáno 2011

New mitochondrial genomes of 39 soil dwelling Coleoptera from metagenome sequencing

Autor Andújar, Carmelo, Arribas, Paula, Motyka, Michal, Bocek, Mathew, Bocak, Ladislav, Linard, Benjamin, Vogler, Alfried P.
Vydáno v Mitochondrial DNA B Resour (2019)

Metagenome Skimming of Insect Specimen Pools: Potential for Comparative Genomics

Autor Linard, Benjamin, Crampton-Platt, Alex, Gillett, Conrad P.D.T., Timmermans, Martijn J.T.N., Vogler, Alfried P.
Vydáno v Genome Biol Evol (2015)

OrthoInspector 3.0: open portal for comparative genomics

Autor Nevers, Yannis, Kress, Arnaud, Defosset, Audrey, Ripp, Raymond, Linard, Benjamin, Thompson, Julie D, Poch, Olivier, Lecompte, Odile
Vydáno v Nucleic Acids Res (2019)

Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents

Autor Paula, Débora P., Linard, Benjamin, Crampton-Platt, Alex, Srivathsan, Amrita, Timmermans, Martijn J. T. N., Sujii, Edison R., Pires, Carmen S. S., Souza, Lucas M., Andow, David A., Vogler, Alfried P.
Vydáno v PLoS One (2016)

Ten Years of Collaborative Progress in the Quest for Orthologs

Autor Linard, Benjamin, Ebersberger, Ingo, McGlynn, Shawn E, Glover, Natasha, Mochizuki, Tomohiro, Patricio, Mateus, Lecompte, Odile, Nevers, Yannis, Thomas, Paul D, Gabaldón, Toni, Sonnhammer, Erik, Dessimoz, Christophe, Uchiyama, Ikuo
Vydáno v Mol Biol Evol (2021)

KD4v: comprehensible knowledge discovery system for missense variant

Autor Luu, Tien-Dao, Rusu, Alin, Walter, Vincent, Linard, Benjamin, Poidevin, Laetitia, Ripp, Raymond, Moulinier, Luc, Muller, Jean, Raffelsberger, Wolfgang, Wicker, Nicolas, Lecompte, Odile, Thompson, Julie D., Poch, Olivier, Nguyen, Hoan
Vydáno 2012

Standardized benchmarking in the quest for orthologs

Autor Altenhoff, Adrian M, Boeckmann, Brigitte, Capella-Gutierrez, Salvador, Dalquen, Daniel A, DeLuca, Todd, Forslund, Kristoffer, Huerta-Cepas, Jaime, Linard, Benjamin, Pereira, Cécile, Pryszcz, Leszek P, Schreiber, Fabian, da Silva, Alan Sousa, Szklarczyk, Damian, Train, Clément-Marie, Bork, Peer, Lecompte, Odile, von Mering, Christian, Xenarios, Ioannis, Sjölander, Kimmen, Jensen, Lars Juhl, Martin, Maria J, Muffato, Matthieu, Gabaldón, Toni, Lewis, Suzanna E, Thomas, Paul D, Sonnhammer, Erik, Dessimoz, Christophe
Vydáno v Nat Methods (2016)

Toward community standards in the quest for orthologs

Autor Dessimoz, Christophe, Gabaldón, Toni, Roos, David S., Sonnhammer, Erik L. L., Herrero, Javier, Altenhoff, Adrian, Apweiler, Rolf, Ashburner, Michael, Blake, Judith, Boeckmann, Brigitte, Bridge, Alan, Bruford, Elspeth, Cherry, Mike, Conte, Matthieu, Dannie, Durand, Datta, Ruchira, Dessimoz, Christophe, Domelevo Entfellner, Jean-Baka, Ebersberger, Ingo, Gabaldón, Toni, Galperin, Michael, Herrero, Javier, Joseph, Jacob, Koestler, Tina, Kriventseva, Evgenia, Lecompte, Odile, Leunissen, Jack, Lewis, Suzanna, Linard, Benjamin, Livstone, Michael S., Lu, Hui-Chun, Martin, Maria, Mazumder, Raja, Messina, David, Miele, Vincent, Muffato, Matthieu, Perrière, Guy, Punta, Marco, Roos, David, Rouard, Mathieu, Schmitt, Thomas, Schreiber, Fabian, Silva, Alan, Sjölander, Kimmen, Škunca, Nives, Sonnhammer, Erik, Stanley, Eleanor, Szklarczyk, Radek, Thomas, Paul, Uchiyama, Ikuo, Van Bel, Michiel, Vandepoele, Klaas, Vilella, Albert J., Yates, Andrew, Zdobnov, Evgeny
Vydáno 2012