Gene Ontology: looking backwards and forwards

Por Lewis, Suzanna E
Publicado em 2005

Sequence Ontology Annotation Guide

Por Eilbeck, Karen, Lewis, Suzanna E.
Publicado em 2004

Phenotype Ontology Research Coordination Network meeting report: creating a community network for comparing and leveraging phenotype-genotype knowledge across species

Por Mabee, Paula, Deans, Andrew, Huala, Eva, Lewis, Suzanna E
Publicado em 2012

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

Por Gaudet, Pascale, Livstone, Michael S., Lewis, Suzanna E., Thomas, Paul D.
Publicado em 2011

Large-scale inference of gene function through phylogenetic annotation of Gene Ontology terms: case study of the apoptosis and autophagy cellular processes

Por Feuermann, Marc, Gaudet, Pascale, Mi, Huaiyu, Lewis, Suzanna E., Thomas, Paul D.
Publicado no Database (Oxford) (2016)

The environment ontology: contextualising biological and biomedical entities

Por Buttigieg, Pier Luigi, Morrison, Norman, Smith, Barry, Mungall, Christopher J, Lewis, Suzanna E
Publicado em 2013

On the Use of Gene Ontology Annotations to Assess Functional Similarity among Orthologs and Paralogs: A Short Report

Por Thomas, Paul D., Wood, Valerie, Mungall, Christopher J., Lewis, Suzanna E., Blake, Judith A.
Publicado em 2012

Uberon, an integrative multi-species anatomy ontology

Por Mungall, Christopher J, Torniai, Carlo, Gkoutos, Georgios V, Lewis, Suzanna E, Haendel, Melissa A
Publicado em 2012

A knowledge based approach to matching human neurodegenerative disease and animal models

Por Maynard, Sarah M., Mungall, Christopher J., Lewis, Suzanna E., Imam, Fahim T., Martone, Maryann E.
Publicado em 2013

Genome Annotation Assessment in Drosophila melanogaster

Por Reese, Martin G., Hartzell, George, Harris, Nomi L., Ohler, Uwe, Abril, Josep F., Lewis, Suzanna E.
Publicado em 2000

The Sequence Ontology: a tool for the unification of genome annotations

Por Eilbeck, Karen, Lewis, Suzanna E, Mungall, Christopher J, Yandell, Mark, Stein, Lincoln, Durbin, Richard, Ashburner, Michael
Publicado em 2005

Linking Human Diseases to Animal Models Using Ontology-Based Phenotype Annotation

Por Washington, Nicole L., Haendel, Melissa A., Mungall, Christopher J., Ashburner, Michael, Westerfield, Monte, Lewis, Suzanna E.
Publicado em 2009

Integrating phenotype ontologies across multiple species

Por Mungall, Christopher J, Gkoutos, Georgios V, Smith, Cynthia L, Haendel, Melissa A, Lewis, Suzanna E, Ashburner, Michael
Publicado em 2010

The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation

Por Buttigieg, Pier Luigi, Pafilis, Evangelos, Lewis, Suzanna E., Schildhauer, Mark P., Walls, Ramona L., Mungall, Christopher J.
Publicado no J Biomed Semantics (2016)

MSAViewer: interactive JavaScript visualization of multiple sequence alignments

Por Yachdav, Guy, Wilzbach, Sebastian, Rauscher, Benedikt, Sheridan, Robert, Sillitoe, Ian, Procter, James, Lewis, Suzanna E., Rost, Burkhard, Goldberg, Tatyana
Publicado no Bioinformatics (2016)

Survey-based naming conventions for use in OBO Foundry ontology development

Por Schober, Daniel, Smith, Barry, Lewis, Suzanna E, Kusnierczyk, Waclaw, Lomax, Jane, Mungall, Chris, Taylor, Chris F, Rocca-Serra, Philippe, Sansone, Susanna-Assunta
Publicado em 2009

Standardized description of scientific evidence using the Evidence Ontology (ECO)

Por Chibucos, Marcus C., Mungall, Christopher J., Balakrishnan, Rama, Christie, Karen R., Huntley, Rachael P., White, Owen, Blake, Judith A., Lewis, Suzanna E., Giglio, Michelle
Publicado em 2014

Systematic determination of patterns of gene expression during Drosophila embryogenesis

Por Tomancak, Pavel, Beaton, Amy, Weiszmann, Richard, Kwan, Elaine, Shu, ShengQiang, Lewis, Suzanna E, Richards, Stephen, Ashburner, Michael, Hartenstein, Volker, Celniker, Susan E, Rubin, Gerald M
Publicado em 2002

Quest for Orthologs Entails Quest for Tree of Life: In Search of the Gene Stream

Por Boeckmann, Brigitte, Marcet-Houben, Marina, Rees, Jonathan A., Forslund, Kristoffer, Huerta-Cepas, Jaime, Muffato, Matthieu, Yilmaz, Pelin, Xenarios, Ioannis, Bork, Peer, Lewis, Suzanna E., Gabaldón, Toni
Publicado no Genome Biol Evol (2015)

Web Apollo: a web-based genomic annotation editing platform

Por Lee, Eduardo, Helt, Gregg A, Reese, Justin T, Munoz-Torres, Monica C, Childers, Chris P, Buels, Robert M, Stein, Lincoln, Holmes, Ian H, Elsik, Christine G, Lewis, Suzanna E
Publicado em 2013