Gaussian process regression bootstrapping: exploring the effects of uncertainty in time course data

Por Kirk, Paul D. W., Stumpf, Michael P. H.
Publicado em 2009

Parameter Inference for Biochemical Systems that Undergo a Hopf Bifurcation

Por Kirk, Paul D. W., Toni, Tina, Stumpf, Michael P. H.
Publicado em 2008

A graph theoretical approach to data fusion

Por Žurauskienė, Justina, Kirk, Paul D.W., Stumpf, Michael P.H.
Publicado no Stat Appl Genet Mol Biol (2016)

Cellular population dynamics control the robustness of the stem cell niche

Por MacLean, Adam L., Kirk, Paul D. W., Stumpf, Michael P. H.
Publicado no Biol Open (2015)

A Bayesian mixture modelling approach for spatial proteomics

Por Crook, Oliver M., Mulvey, Claire M., Kirk, Paul D. W., Lilley, Kathryn S., Gatto, Laurent
Publicado no PLoS Comput Biol (2018)

A Bioconductor workflow for the Bayesian analysis of spatial proteomics

Por Crook, Oliver M., Breckels, Lisa M., Lilley, Kathryn S., Kirk, Paul D.W., Gatto, Laurent
Publicado no F1000Res (2019)

Model Selection in Systems Biology Depends on Experimental Design

Por Silk, Daniel, Kirk, Paul D. W., Barnes, Chris P., Toni, Tina, Stumpf, Michael P. H.
Publicado em 2014

Accelerating Bayesian Hierarchical Clustering of Time Series Data with a Randomised Algorithm

Por Darkins, Robert, Cooke, Emma J., Ghahramani, Zoubin, Kirk, Paul D. W., Wild, David L., Savage, Richard S.
Publicado em 2013

MEANS: python package for Moment Expansion Approximation, iNference and Simulation

Por Fan, Sisi, Geissmann, Quentin, Lakatos, Eszter, Lukauskas, Saulius, Ale, Angelique, Babtie, Ann C., Kirk, Paul D. W., Stumpf, Michael P. H.
Publicado no Bioinformatics (2016)

Designing attractive models via automated identification of chaotic and oscillatory dynamical regimes

Por Silk, Daniel, Kirk, Paul D.W., Barnes, Chris P., Toni, Tina, Rose, Anna, Moon, Simon, Dallman, Margaret J., Stumpf, Michael P.H.
Publicado em 2011

Robustness of MEK-ERK Dynamics and Origins of Cell-to-Cell Variability in MAPK Signaling

Por Filippi, Sarah, Barnes, Chris P., Kirk, Paul D.W., Kudo, Takamasa, Kunida, Katsuyuki, McMahon, Siobhan S., Tsuchiya, Takaho, Wada, Takumi, Kuroda, Shinya, Stumpf, Michael P.H.
Publicado no Cell Rep (2016)

A Comprehensive Evaluation of Nasal and Bronchial Cytokines and Chemokines Following Experimental Rhinovirus Infection in Allergic Asthma: Increased Interferons (IFN-γ and IFN-λ) a...

Por Hansel, Trevor T., Tunstall, Tanushree, Trujillo-Torralbo, Maria-Belen, Shamji, Betty, del-Rosario, Ajerico, Dhariwal, Jaideep, Kirk, Paul D.W., Stumpf, Michael P.H., Koopmann, Jens, Telcian, Aurica, Aniscenko, Julia, Gogsadze, Leila, Bakhsoliani, Eteri, Stanciu, Luminita, Bartlett, Nathan, Edwards, Michael, Walton, Ross, Mallia, Patrick, Hunt, Toby M., Hunt, Trevor L., Hunt, Duncan G., Westwick, John, Edwards, Matthew, Kon, Onn Min, Jackson, David J., Johnston, Sebastian L.
Publicado no EBioMedicine (2017)