Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data

Por Kim, Jong Kyoung, Marioni, John C
Publicado em 2013

NFκB and STAT3 synergistically activate the expression of FAT10, a gene counteracting the tumor suppressor p53

Por Choi, Yongwook, Kim, Jong Kyoung, Yoo, Joo-Yeon
Publicado no Mol Oncol (2014)

Identification of co-occurring transcription factor binding sites from DNA sequence using clustered position weight matrices

Por Oh, Young Min, Kim, Jong Kyoung, Choi, Seungjin, Yoo, Joo-Yeon
Publicado em 2012

Prediction and Experimental Validation of Novel STAT3 Target Genes in Human Cancer Cells

Por Oh, Young Min, Kim, Jong Kyoung, Choi, Yongwook, Choi, Seungjin, Yoo, Joo-Yeon
Publicado em 2009

Arabidopsis Nuclear-Encoded Plastid Transit Peptides Contain Multiple Sequence Subgroups with Distinctive Chloroplast-Targeting Sequence Motifs

Por Lee, Dong Wook, Kim, Jong Kyoung, Lee, Sumin, Choi, Seungjin, Kim, Sanguk, Hwang, Inhwan
Publicado em 2008

Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

Por Kim, Jong Kyoung, Kolodziejczyk, Aleksandra A., Illicic, Tomislav, Teichmann, Sarah A., Marioni, John C.
Publicado no Nat Commun (2015)

Corrigendum: Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression

Por Kim, Jong Kyoung, Kolodziejczyk, Aleksandra A., Ilicic, Tomislav, Teichmann, Sarah A., Marioni, John C.
Publicado no Nat Commun (2016)

Classification of low quality cells from single-cell RNA-seq data

Por Ilicic, Tomislav, Kim, Jong Kyoung, Kolodziejczyk, Aleksandra A., Bagger, Frederik Otzen, McCarthy, Davis James, Marioni, John C., Teichmann, Sarah A.
Publicado no Genome Biol (2016)

Stella modulates transcriptional and endogenous retrovirus programs during maternal-to-zygotic transition

Por Huang, Yun, Kim, Jong Kyoung, Do, Dang Vinh, Lee, Caroline, Penfold, Christopher A, Zylicz, Jan J, Marioni, John C, Hackett, Jamie A, Surani, M Azim
Publicado no eLife (2017)

Genome-wide Bisulfite Sequencing in Zygotes Identifies Demethylation Targets and Maps the Contribution of TET3 Oxidation

Por Peat, Julian R., Dean, Wendy, Clark, Stephen J., Krueger, Felix, Smallwood, Sébastien A., Ficz, Gabriella, Kim, Jong Kyoung, Marioni, John C., Hore, Timothy A., Reik, Wolf
Publicado no Cell Rep (2014)

Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression

Por Kar, Gozde, Kim, Jong Kyoung, Kolodziejczyk, Aleksandra A., Natarajan, Kedar Nath, Torlai Triglia, Elena, Mifsud, Borbala, Elderkin, Sarah, Marioni, John C., Pombo, Ana, Teichmann, Sarah A.
Publicado no Nat Commun (2017)

Single Cell RNA-Sequencing of Pluripotent States Unlocks Modular Transcriptional Variation

Por Kolodziejczyk, Aleksandra A., Kim, Jong Kyoung, Tsang, Jason C.H., Ilicic, Tomislav, Henriksson, Johan, Natarajan, Kedar N., Tuck, Alex C., Gao, Xuefei, Bühler, Marc, Liu, Pentao, Marioni, John C., Teichmann, Sarah A.
Publicado no Cell Stem Cell (2015)