MrBUMP: an automated pipeline for molecular replacement

Por Keegan, Ronan M., Winn, Martyn D.
Publicado em 2008

Application of the AMPLE cluster-and-truncate approach to NMR structures for molecular replacement

Por Bibby, Jaclyn, Keegan, Ronan M., Mayans, Olga, Winn, Martyn D., Rigden, Daniel J.
Publicado em 2013

Evaluating the solution from MrBUMP and BALBES

Por Keegan, Ronan M., Long, Fei, Fazio, Vincent J., Winn, Martyn D., Murshudov, Garib N., Vagin, Alexei A.
Publicado em 2011

Routine phasing of coiled-coil protein crystal structures with AMPLE

Por Thomas, Jens M. H., Keegan, Ronan M., Bibby, Jaclyn, Winn, Martyn D., Mayans, Olga, Rigden, Daniel J.
Publicado no IUCrJ (2015)

Residue contacts predicted by evolutionary covariance extend the application of ab initio molecular replacement to larger and more challenging protein folds

Por Simkovic, Felix, Thomas, Jens M. H., Keegan, Ronan M., Winn, Martyn D., Mayans, Olga, Rigden, Daniel J.
Publicado no IUCrJ (2016)

Approaches to ab initio molecular replacement of α-helical transmembrane proteins

Por Thomas, Jens M. H., Simkovic, Felix, Keegan, Ronan, Mayans, Olga, Zhang, Chengxin, Zhang, Yang, Rigden, Daniel J.
Publicado no Acta Crystallogr D Struct Biol (2017)

Crystal structure of the type IV secretion system component CagX from Helicobacter pylori

Por Zhang, Jin, Fan, Fei, Zhao, Yanhe, Sun, Lifang, Liu, Yadan, Keegan, Ronan M., Isupov, Michail N., Wu, Yunkun
Publicado no Acta Crystallogr F Struct Biol Commun (2017)

Exploring the speed and performance of molecular replacement with AMPLE using QUARK ab initio protein models

Por Keegan, Ronan M., Bibby, Jaclyn, Thomas, Jens, Xu, Dong, Zhang, Yang, Mayans, Olga, Winn, Martyn D., Rigden, Daniel J.
Publicado no Acta Crystallogr D Biol Crystallogr (2015)

Ensembles generated from crystal structures of single distant homologues solve challenging molecular-replacement cases in AMPLE

Por Rigden, Daniel J., Thomas, Jens M. H., Simkovic, Felix, Simpkin, Adam, Winn, Martyn D., Mayans, Olga, Keegan, Ronan M.
Publicado no Acta Crystallogr D Struct Biol (2018)

Crystal Structure of the Nipah Virus Phosphoprotein Tetramerization Domain

Por Bruhn, Jessica F., Barnett, Katherine C., Bibby, Jaclyn, Thomas, Jens M. H., Keegan, Ronan M., Rigden, Daniel J., Bornholdt, Zachary A., Saphire, Erica Ollmann
Publicado em 2014

Recent developments in MrBUMP: better search-model preparation, graphical interaction with search models, and solution improvement and assessment

Por Keegan, Ronan M., McNicholas, Stuart J., Thomas, Jens M. H., Simpkin, Adam J., Simkovic, Felix, Uski, Ville, Ballard, Charles C., Winn, Martyn D., Wilson, Keith S., Rigden, Daniel J.
Publicado no Acta Crystallogr D Struct Biol (2018)

SIMBAD: a sequence-independent molecular-replacement pipeline

Por Simpkin, Adam J., Simkovic, Felix, Thomas, Jens M. H., Savko, Martin, Lebedev, Andrey, Uski, Ville, Ballard, Charles, Wojdyr, Marcin, Wu, Rui, Sanishvili, Ruslan, Xu, Yibin, Lisa, María-Natalia, Buschiazzo, Alejandro, Shepard, William, Rigden, Daniel J., Keegan, Ronan M.
Publicado no Acta Crystallogr D Struct Biol (2018)

Overview of the CCP4 suite and current developments

Por Winn, Martyn D., Ballard, Charles C., Cowtan, Kevin D., Dodson, Eleanor J., Emsley, Paul, Evans, Phil R., Keegan, Ronan M., Krissinel, Eugene B., Leslie, Andrew G. W., McCoy, Airlie, McNicholas, Stuart J., Murshudov, Garib N., Pannu, Navraj S., Potterton, Elizabeth A., Powell, Harold R., Read, Randy J., Vagin, Alexei, Wilson, Keith S.
Publicado em 2011

CCP4i2: the new graphical user interface to the CCP4 program suite

Por Potterton, Liz, Agirre, Jon, Ballard, Charles, Cowtan, Kevin, Dodson, Eleanor, Evans, Phil R., Jenkins, Huw T., Keegan, Ronan, Krissinel, Eugene, Stevenson, Kyle, Lebedev, Andrey, McNicholas, Stuart J., Nicholls, Robert A., Noble, Martin, Pannu, Navraj S., Roth, Christian, Sheldrick, George, Skubak, Pavol, Turkenburg, Johan, Uski, Ville, von Delft, Frank, Waterman, David, Wilson, Keith, Winn, Martyn, Wojdyr, Marcin
Publicado no Acta Crystallogr D Struct Biol (2018)