RNA-Dependent Cysteine Biosynthesis in Bacteria and Archaea

Por Mukai, Takahito, Crnković, Ana, Umehara, Takuya, Ivanova, Natalia N., Kyrpides, Nikos C., Söll, Dieter
Publicado no mBio (2017)

Estimating DNA coverage and abundance in metagenomes using a gamma approximation

Por Hooper, Sean D., Dalevi, Daniel, Pati, Amrita, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Publicado em 2010

The DOE-JGI Standard Operating Procedure for the Annotations of Microbial Genomes

Por Mavromatis, Konstantinos, Ivanova, Natalia N., Chen, I-Min A., Szeto, Ernest, Markowitz, Victor M., Kyrpides, Nikos C.
Publicado em 2009

Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics

Por Baran, Richard, Ivanova, Natalia N., Jose, Nick, Garcia-Pichel, Ferran, Kyrpides, Nikos C., Gugger, Muriel, Northen, Trent R.
Publicado em 2013

Discovery of Novel Plant Interaction Determinants from the Genomes of 163 Root Nodule Bacteria

Por Seshadri, Rekha, Reeve, Wayne G., Ardley, Julie K., Tennessen, Kristin, Woyke, Tanja, Kyrpides, Nikos C., Ivanova, Natalia N.
Publicado no Sci Rep (2015)

Improving Microbial Genome Annotations in an Integrated Database Context

Por Chen, I-Min A., Markowitz, Victor M., Chu, Ken, Anderson, Iain, Mavromatis, Konstantinos, Kyrpides, Nikos C., Ivanova, Natalia N.
Publicado em 2013

Facile recoding of selenocysteine in nature

Por Mukai, Takahito, Englert, Markus, Tripp, H. James, Miller, Corwin, Ivanova, Natalia N., Rubin, Edward M., Kyrpides, Nikos C., Söll, Dieter
Publicado no Angew Chem Int Ed Engl (2016)

Leichte Neucodierung von Selenocystein in der Natur

Por Mukai, Takahito, Englert, Markus, Tripp, H. James, Miller, Corwin, Ivanova, Natalia N., Rubin, Edward M., Kyrpides, Nikos C., Söll, Dieter
Publicado no Angew Chem Weinheim Bergstr Ger (2016)

A Genomic Encyclopedia of the Root Nodule Bacteria: assessing genetic diversity through a systematic biogeographic survey

Por Reeve, Wayne, Ardley, Julie, Tian, Rui, Eshragi, Leila, Yoon, Je Won, Ngamwisetkun, Pinyaruk, Seshadri, Rekha, Ivanova, Natalia N, Kyrpides, Nikos C
Publicado no Stand Genomic Sci (2015)

Transfer RNAs with novel cloverleaf structures

Por Mukai, Takahito, Vargas-Rodriguez, Oscar, Englert, Markus, Tripp, H. James, Ivanova, Natalia N., Rubin, Edward M., Kyrpides, Nikos C., Söll, Dieter
Publicado no Nucleic Acids Res (2017)

Towards a balanced view of the bacterial tree of life

Por Schulz, Frederik, Eloe-Fadrosh, Emiley A., Bowers, Robert M., Jarett, Jessica, Nielsen, Torben, Ivanova, Natalia N., Kyrpides, Nikos C., Woyke, Tanja
Publicado no Microbiome (2017)

Correction to: Towards a balanced view of the bacterial tree of life

Por Schulz, Frederik, Eloe-Fadrosh, Emiley A., Bowers, Robert M., Jarett, Jessica, Nielsen, Torben, Ivanova, Natalia N., Kyrpides, Nikos C., Woyke, Tanja
Publicado no Microbiome (2017)

IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes

Por Hadjithomas, Michalis, Chen, I-Min A., Chu, Ken, Huang, Jinghua, Ratner, Anna, Palaniappan, Krishna, Andersen, Evan, Markowitz, Victor, Kyrpides, Nikos C., Ivanova, Natalia N.
Publicado no Nucleic Acids Res (2017)

The Complete Multipartite Genome Sequence of Cupriavidus necator JMP134, a Versatile Pollutant Degrader

Por Lykidis, Athanasios, Pérez-Pantoja, Danilo, Ledger, Thomas, Mavromatis, Kostantinos, Anderson, Iain J., Ivanova, Natalia N., Hooper, Sean D., Lapidus, Alla, Lucas, Susan, González, Bernardo, Kyrpides, Nikos C.
Publicado em 2010

Genome sequence of the Wenxinia marina type strain (DSM 24838(T)), a representative of the Roseobacter group isolated from oilfield sediments

Por Riedel, Thomas, Fiebig, Anne, Han, James, Huntemann, Marcel, Spring, Stefan, Petersen, Jörn, Ivanova, Natalia N., Markowitz, Victor, Woyke, Tanja, Göker, Markus, Kyrpides, Nikos C., Klenk, Hans-Peter
Publicado em 2014

Permanent draft genome sequence of Desulfurococcus mobilis type strain DSM 2161, a thermoacidophilic sulfur-reducing crenarchaeon isolated from acidic hot springs of Hveravellir, I...

Por Susanti, Dwi, Johnson, Eric F., Lapidus, Alla, Han, James, Reddy, T. B. K., Pilay, Manoj, Ivanova, Natalia N., Markowitz, Victor M., Woyke, Tanja, Kyrpides, Nikos C., Mukhopadhyay, Biswarup
Publicado no Stand Genomic Sci (2016)

Genome-Based Taxonomic Classification of Bacteroidetes

Por Hahnke, Richard L., Meier-Kolthoff, Jan P., García-López, Marina, Mukherjee, Supratim, Huntemann, Marcel, Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., Klenk, Hans-Peter, Göker, Markus
Publicado no Front Microbiol (2016)

Corrigendum: Genome-Based Taxonomic Classification of Bacteroidetes

Por Hahnke, Richard L., Meier-Kolthoff, Jan P., García-López, Marina, Mukherjee, Supratim, Huntemann, Marcel, Ivanova, Natalia N., Woyke, Tanja, Kyrpides, Nikos C., Klenk, Hans-Peter, Göker, Markus
Publicado no Front Microbiol (2018)

The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions

Por Markowitz, Victor M., Szeto, Ernest, Palaniappan, Krishna, Grechkin, Yuri, Chu, Ken, Chen, I-Min A., Dubchak, Inna, Anderson, Iain, Lykidis, Athanasios, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Publicado em 2008

The integrated microbial genomes system: an expanding comparative analysis resource

Por Markowitz, Victor M., Chen, I-Min A., Palaniappan, Krishna, Chu, Ken, Szeto, Ernest, Grechkin, Yuri, Ratner, Anna, Anderson, Iain, Lykidis, Athanasios, Mavromatis, Konstantinos, Ivanova, Natalia N., Kyrpides, Nikos C.
Publicado em 2010