From Genotype to Phenotype: Linking Bioinformatics and Medical Informatics Ontologies

par Holloway, Ele
Publié 2002

Modeling sample variables with an Experimental Factor Ontology

par Malone, James, Holloway, Ele, Adamusiak, Tomasz, Kapushesky, Misha, Zheng, Jie, Kolesnikov, Nikolay, Zhukova, Anna, Brazma, Alvis, Parkinson, Helen
Publié 2010

Gene Expression Atlas at the European Bioinformatics Institute

par Kapushesky, Misha, Emam, Ibrahim, Holloway, Ele, Kurnosov, Pavel, Zorin, Andrey, Malone, James, Rustici, Gabriella, Williams, Eleanor, Parkinson, Helen, Brazma, Alvis
Publié 2010

MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

par Rayner, Tim F., Rezwan, Faisal Ibne, Lukk, Margus, Bradley, Xiangqun Zheng, Farne, Anna, Holloway, Ele, Malone, James, Williams, Eleanor, Parkinson, Helen
Publié 2009

ArrayExpress—a public repository for microarray gene expression data at the EBI

par Brazma, Alvis, Parkinson, Helen, Sarkans, Ugis, Shojatalab, Mohammadreza, Vilo, Jaak, Abeygunawardena, Niran, Holloway, Ele, Kapushesky, Misha, Kemmeren, Patrick, Lara, Gonzalo Garcia, Oezcimen, Ahmet, Rocca-Serra, Philippe, Sansone, Susanna-Assunta
Publié 2003

Plant-Based Microarray Data at the European Bioinformatics Institute. Introducing AtMIAMExpress, a Submission Tool for Arabidopsis Gene Expression Data to ArrayExpress

par Mukherjee, Gaurab, Abeygunawardena, Niran, Parkinson, Helen, Contrino, Sergio, Durinck, Steffen, Farne, Anna, Holloway, Ele, Lilja, Per, Moreau, Yves, Oezcimen, Ahmet, Rayner, Tim, Sharma, Anjan, Brazma, Alvis, Sarkans, Ugis, Shojatalab, Mohammadreza
Publié 2005

ArrayExpress update—an archive of microarray and high-throughput sequencing-based functional genomics experiments

par Parkinson, Helen, Sarkans, Ugis, Kolesnikov, Nikolay, Abeygunawardena, Niran, Burdett, Tony, Dylag, Miroslaw, Emam, Ibrahim, Farne, Anna, Hastings, Emma, Holloway, Ele, Kurbatova, Natalja, Lukk, Margus, Malone, James, Mani, Roby, Pilicheva, Ekaterina, Rustici, Gabriella, Sharma, Anjan, Williams, Eleanor, Adamusiak, Tomasz, Brandizi, Marco, Sklyar, Nataliya, Brazma, Alvis
Publié 2011

Gene Expression Atlas update—a value-added database of microarray and sequencing-based functional genomics experiments

par Kapushesky, Misha, Adamusiak, Tomasz, Burdett, Tony, Culhane, Aedin, Farne, Anna, Filippov, Alexey, Holloway, Ele, Klebanov, Andrey, Kryvych, Nataliya, Kurbatova, Natalja, Kurnosov, Pavel, Malone, James, Melnichuk, Olga, Petryszak, Robert, Pultsin, Nikolay, Rustici, Gabriella, Tikhonov, Andrew, Travillian, Ravensara S., Williams, Eleanor, Zorin, Andrey, Parkinson, Helen, Brazma, Alvis
Publié 2012

A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB

par Rayner, Tim F, Rocca-Serra, Philippe, Spellman, Paul T, Causton, Helen C, Farne, Anna, Holloway, Ele, Irizarry, Rafael A, Liu, Junmin, Maier, Donald S, Miller, Michael, Petersen, Kjell, Quackenbush, John, Sherlock, Gavin, Stoeckert, Christian J, White, Joseph, Whetzel, Patricia L, Wymore, Farrell, Parkinson, Helen, Sarkans, Ugis, Ball, Catherine A, Brazma, Alvis
Publié 2006

ArrayExpress update—from an archive of functional genomics experiments to the atlas of gene expression

par Parkinson, Helen, Kapushesky, Misha, Kolesnikov, Nikolay, Rustici, Gabriella, Shojatalab, Mohammad, Abeygunawardena, Niran, Berube, Hugo, Dylag, Miroslaw, Emam, Ibrahim, Farne, Anna, Holloway, Ele, Lukk, Margus, Malone, James, Mani, Roby, Pilicheva, Ekaterina, Rayner, Tim F., Rezwan, Faisal, Sharma, Anjan, Williams, Eleanor, Bradley, Xiangqun Zheng, Adamusiak, Tomasz, Brandizi, Marco, Burdett, Tony, Coulson, Richard, Krestyaninova, Maria, Kurnosov, Pavel, Maguire, Eamonn, Neogi, Sudeshna Guha, Rocca-Serra, Philippe, Sansone, Susanna-Assunta, Sklyar, Nataliya, Zhao, Mengyao, Sarkans, Ugis, Brazma, Alvis
Publié 2009