Stringent response of Escherichia coli: revisiting the bibliome using literature mining

Por Carneiro, Sónia, Lourenço, Anália, Ferreira, Eugénio C, Rocha, Isabel
Publicado em 2011

Reconstructing genome-scale metabolic models with merlin

Por Dias, Oscar, Rocha, Miguel, Ferreira, Eugénio C., Rocha, Isabel
Publicado no Nucleic Acids Res (2015)

Genome-wide metabolic (re-) annotation of Kluyveromyces lactis

Por Dias, Oscar, Gombert, Andreas K, Ferreira, Eugénio C, Rocha, Isabel
Publicado em 2012

Population Dynamics of a Salmonella Lytic Phage and Its Host: Implications of the Host Bacterial Growth Rate in Modelling

Por Santos, Sílvio B., Carvalho, Carla, Azeredo, Joana, Ferreira, Eugénio C.
Publicado em 2014

Correction: Population Dynamics of a Salmonella Lytic Phage and Its Host: Implications of the Host Bacterial Growth Rate in Modelling

Por Santos, Sílvio B., Carvalho, Carla, Azeredo, Joana, Ferreira, Eugénio C.
Publicado no PLoS One (2015)

A Comparative Proteome Analysis of Escherichia coli ΔrelA Mutant Cells

Por Carneiro, Sónia, Villas-Bôas, Silas, Ferreira, Eugénio C., Rocha, Isabel
Publicado no Front Bioeng Biotechnol (2016)

Exploring the gap between dynamic and constraint-based models of metabolism

Por Machado, Daniel, Costa, Rafael S., Ferreira, Eugénio C., Rocha, Isabel, Tidor, Bruce
Publicado em 2012

Influence of the RelA Activity on E. coli Metabolism by Metabolite Profiling of Glucose-Limited Chemostat Cultures

Por Carneiro, Sónia, Villas-Bôas, Silas G., Ferreira, Eugénio C., Rocha, Isabel
Publicado em 2012

Random sampling of elementary flux modes in large-scale metabolic networks

Por Machado, Daniel, Soons, Zita, Patil, Kiran Raosaheb, Ferreira, Eugénio C., Rocha, Isabel
Publicado em 2012

Identification of Metabolic Engineering Targets through Analysis of Optimal and Sub-Optimal Routes

Por Soons, Zita I. T. A., Ferreira, Eugénio C., Patil, Kiran R., Rocha, Isabel
Publicado em 2013

Modeling formalisms in Systems Biology

Por Machado, Daniel, Costa, Rafael S, Rocha, Miguel, Ferreira, Eugénio C, Tidor, Bruce, Rocha, Isabel
Publicado em 2011

Genome-wide metabolic re-annotation of Ashbya gossypii: new insights into its metabolism through a comparative analysis with Saccharomyces cerevisiae and Kluyveromyces lactis

Por Gomes, Daniel, Aguiar, Tatiana Q, Dias, Oscar, Ferreira, Eugénio C, Domingues, Lucília, Rocha, Isabel
Publicado em 2014

The use of antibiotics to improve phage detection and enumeration by the double-layer agar technique

Por Santos, Sílvio B, Carvalho, Carla M, Sillankorva, Sanna, Nicolau, Ana, Ferreira, Eugénio C, Azeredo, Joana
Publicado em 2009

Semantic annotation of biological concepts interplaying microbial cellular responses

Por Carreira, Rafael, Carneiro, Sónia, Pereira, Rui, Rocha, Miguel, Rocha, Isabel, Ferreira, Eugénio C, Lourenço, Anália
Publicado em 2011

Quantification of the CBD-FITC conjugates surface coating on cellulose fibres

Por Vilanova Manuel, Mota Manuel, Ferreira Eugénio C, Amaral António L, Pinto Ricardo, Ruel Katia, Gama Miguel
Publicado em 2008-01-01

Quantification of the CBD-FITC conjugates surface coating on cellulose fibres

Por Pinto, Ricardo, Amaral, António L, Ferreira, Eugénio C, Mota, Manuel, Vilanova, Manuel, Ruel, Katia, Gama, Miguel
Publicado em 2008

Natural computation meta-heuristics for the in silico optimization of microbial strains

Por Rocha, Miguel, Maia, Paulo, Mendes, Rui, Pinto, José P, Ferreira, Eugénio C, Nielsen, Jens, Patil, Kiran Raosaheb, Rocha, Isabel
Publicado em 2008

Molecular Aspects and Comparative Genomics of Bacteriophage Endolysins

Por Oliveira, Hugo, Melo, Luís D. R., Santos, Sílvio B., Nóbrega, Franklin L., Ferreira, Eugénio C., Cerca, Nuno, Azeredo, Joana, Kluskens, Leon D.
Publicado em 2013

OptFlux: an open-source software platform for in silico metabolic engineering

Por Rocha, Isabel, Maia, Paulo, Evangelista, Pedro, Vilaça, Paulo, Soares, Simão, Pinto, José P, Nielsen, Jens, Patil, Kiran R, Ferreira, Eugénio C, Rocha, Miguel
Publicado em 2010

Genomic and Proteomic Characterization of the Broad-Host-Range Salmonella Phage PVP-SE1: Creation of a New Phage Genus

Por Santos, Sílvio B., Kropinski, Andrew M., Ceyssens, Pieter-Jan, Ackermann, H.-W., Villegas, Andre, Lavigne, Rob, Krylov, Victor N., Carvalho, Carla M., Ferreira, Eugénio C., Azeredo, Joana
Publicado em 2011