Soil Viruses: A New Hope

Autor Emerson, Joanne B.
Vydáno v mSystems (2019)

Multiplex quantitative PCR for single-reaction genetically modified (GM) plant detection and identification of false-positive GM plants linked to Cauliflower mosaic virus (CaMV) in...

Autor Bak, Aurélie, Emerson, Joanne B.
Vydáno v BMC Biotechnol (2019)

Microbial metagenomics

Autor Mongodin, Emmanuel F, Emerson, Joanne B, Nelson, Karen E
Vydáno 2005

Chromosome Evolution in the Thermotogales: Large-Scale Inversions and Strain Diversification of CRISPR Sequences

Autor DeBoy, Robert T., Mongodin, Emmanuel F., Emerson, Joanne B., Nelson, Karen E.
Vydáno 2006

Benchmarking viromics: an in silico evaluation of metagenome-enabled estimates of viral community composition and diversity

Autor Roux, Simon, Emerson, Joanne B., Eloe-Fadrosh, Emiley A., Sullivan, Matthew B.
Vydáno v PeerJ (2017)

New Approaches Indicate Constant Viral Diversity despite Shifts in Assemblage Structure in an Australian Hypersaline Lake

Autor Emerson, Joanne B., Thomas, Brian C., Andrade, Karen, Heidelberg, Karla B., Banfield, Jillian F.
Vydáno 2013

Characterization of eukaryotic microbial diversity in hypersaline Lake Tyrrell, Australia

Autor Heidelberg, Karla B., Nelson, William C., Holm, Johanna B., Eisenkolb, Nadine, Andrade, Karen, Emerson, Joanne B.
Vydáno 2013

Dynamic Viral Populations in Hypersaline Systems as Revealed by Metagenomic Assembly

Autor Emerson, Joanne B., Thomas, Brian C., Andrade, Karen, Allen, Eric E., Heidelberg, Karla B., Banfield, Jillian F.
Vydáno 2012

Virus-Host and CRISPR Dynamics in Archaea-Dominated Hypersaline Lake Tyrrell, Victoria, Australia

Autor Emerson, Joanne B., Andrade, Karen, Thomas, Brian C., Norman, Anders, Allen, Eric E., Heidelberg, Karla B., Banfield, Jillian F.
Vydáno 2013

Viromes outperform total metagenomes in revealing the spatiotemporal patterns of agricultural soil viral communities

Autor Santos-Medellin, Christian, Zinke, Laura A., ter Horst, Anneliek M., Gelardi, Danielle L., Parikh, Sanjai J., Emerson, Joanne B.
Vydáno v ISME J (2021)

De Novo Sequences of Haloquadratum walsbyi from Lake Tyrrell, Australia, Reveal a Variable Genomic Landscape

Autor Tully, Benjamin J., Emerson, Joanne B., Andrade, Karen, Brocks, Jochen J., Allen, Eric E., Banfield, Jillian F., Heidelberg, Karla B.
Vydáno v Archaea (2015)

Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community

Autor Podell, Sheila, Emerson, Joanne B, Jones, Claudia M, Ugalde, Juan A, Welch, Sue, Heidelberg, Karla B, Banfield, Jillian F, Allen, Eric E
Vydáno 2014

Putative archaeal viruses from the mesopelagic ocean

Autor Vik, Dean R., Roux, Simon, Brum, Jennifer R., Bolduc, Ben, Emerson, Joanne B., Padilla, Cory C., Stewart, Frank J., Sullivan, Matthew B.
Vydáno v PeerJ (2017)

De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities

Autor Narasingarao, Priya, Podell, Sheila, Ugalde, Juan A, Brochier-Armanet, Céline, Emerson, Joanne B, Brocks, Jochen J, Heidelberg, Karla B, Banfield, Jillian F, Allen, Eric E
Vydáno 2012

Utilizing novel diversity estimators to quantify multiple dimensions of microbial biodiversity across domains

Autor Doll, Hannah M, Armitage, David W, Daly, Rebecca A, Emerson, Joanne B, Goltsman, Daniela S Aliaga, Yelton, Alexis P, Kerekes, Jennifer, Firestone, Mary K, Potts, Matthew D
Vydáno 2013

Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus

Autor DeBoy, Robert T., Mongodin, Emmanuel F., Fouts, Derrick E., Tailford, Louise E., Khouri, Hoda, Emerson, Joanne B., Mohamoud, Yasmin, Watkins, Kisha, Henrissat, Bernard, Gilbert, Harry J., Nelson, Karen E.
Vydáno 2008

Secrets of Soil Survival Revealed by the Genome Sequence of Arthrobacter aurescens TC1

Autor Mongodin, Emmanuel F, Shapir, Nir, Daugherty, Sean C, DeBoy, Robert T, Emerson, Joanne B, Shvartzbeyn, Alla, Radune, Diana, Vamathevan, Jessica, Riggs, Florenta, Grinberg, Viktoria, Khouri, Hoda, Wackett, Lawrence P, Nelson, Karen E, Sadowsky, Michael J
Vydáno 2006

Metagenomic and lipid analyses reveal a diel cycle in a hypersaline microbial ecosystem

Autor Andrade, Karen, Logemann, Jörn, Heidelberg, Karla B, Emerson, Joanne B, Comolli, Luis R, Hug, Laura A, Probst, Alexander J, Keillar, Angus, Thomas, Brian C, Miller, Christopher S, Allen, Eric E, Moreau, John W, Brocks, Jochen J, Banfield, Jillian F
Vydáno v ISME J (2015)

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

Autor Brulc, Jennifer M., Antonopoulos, Dionysios A., Berg Miller, Margret E., Wilson, Melissa K., Yannarell, Anthony C., Dinsdale, Elizabeth A., Edwards, Robert E., Frank, Edward D., Emerson, Joanne B., Wacklin, Pirjo, Coutinho, Pedro M., Henrissat, Bernard, Nelson, Karen E., White, Bryan A.
Vydáno 2009

Soil Viruses Are Underexplored Players in Ecosystem Carbon Processing

Autor Trubl, Gareth, Jang, Ho Bin, Roux, Simon, Emerson, Joanne B., Solonenko, Natalie, Vik, Dean R., Solden, Lindsey, Ellenbogen, Jared, Runyon, Alexander T., Bolduc, Benjamin, Woodcroft, Ben J., Saleska, Scott R., Tyson, Gene W., Wrighton, Kelly C., Sullivan, Matthew B., Rich, Virginia I.
Vydáno v mSystems (2018)