Analysis of Time-Resolved Gene Expression Measurements across Individuals

Por Elo, Laura L., Schwikowski, Benno
Publicado em 2013

A Note on an Exon-Based Strategy to Identify Differentially Expressed Genes in RNA-Seq Experiments

Por Laiho, Asta, Elo, Laura L.
Publicado no PLoS One (2014)

Enhanced differential expression statistics for data-independent acquisition proteomics

Por Suomi, Tomi, Elo, Laura L.
Publicado no Sci Rep (2017)

Empirical comparison of structure-based pathway methods

Por Jaakkola, Maria K., Elo, Laura L.
Publicado no Brief Bioinform (2016)

Comparison of software packages for detecting differential expression in RNA-seq studies

Por Seyednasrollah, Fatemeh, Laiho, Asta, Elo, Laura L.
Publicado no Brief Bioinform (2015)

A systematic evaluation of normalization methods in quantitative label-free proteomics

Por Välikangas, Tommi, Suomi, Tomi, Elo, Laura L
Publicado no Brief Bioinform (2016)

A comprehensive evaluation of popular proteomics software workflows for label-free proteome quantification and imputation

Por Välikangas, Tommi, Suomi, Tomi, Elo, Laura L
Publicado no Brief Bioinform (2017)

Likelihood contrasts: a machine learning algorithm for binary classification of longitudinal data

Por Klén, Riku, Karhunen, Markku, Elo, Laura L.
Publicado no Sci Rep (2020)

Missing value imputation improves clustering and interpretation of gene expression microarray data

Por Tuikkala, Johannes, Elo, Laura L, Nevalainen, Olli S, Aittokallio, Tero
Publicado em 2008

Probe-level estimation improves the detection of differential splicing in Affymetrix exon array studies

Por Laajala, Essi, Aittokallio, Tero, Lahesmaa, Riitta, Elo, Laura L
Publicado em 2009

ROTS: reproducible RNA-seq biomarker detector—prognostic markers for clear cell renal cell cancer

Por Seyednasrollah, Fatemeh, Rantanen, Krista, Jaakkola, Panu, Elo, Laura L.
Publicado no Nucleic Acids Res (2016)

RepViz: a replicate-driven R tool for visualizing genomic regions

Por Faux, Thomas, Rytkönen, Kalle T., Laiho, Asta, Elo, Laura L.
Publicado no BMC Res Notes (2019)

Predicting Quantitative Genetic Interactions by Means of Sequential Matrix Approximation

Por Järvinen, Aki P., Hiissa, Jukka, Elo, Laura L., Aittokallio, Tero
Publicado em 2008

Comparison of methods to detect differentially expressed genes between single-cell populations

Por Jaakkola, Maria K, Seyednasrollah, Fatemeh, Mehmood, Arfa, Elo, Laura L
Publicado no Brief Bioinform (2017)

Integrative omics approaches provide biological and clinical insights: examples from mitochondrial diseases

Por Khan, Sofia, Ince-Dunn, Gulayse, Suomalainen, Anu, Elo, Laura L.
Publicado no J Clin Invest (2020)

A fully scalable online pre-processing algorithm for short oligonucleotide microarray atlases

Por Lahti, Leo, Torrente, Aurora, Elo, Laura L., Brazma, Alvis, Rung, Johan
Publicado em 2013

ROTS: An R package for reproducibility-optimized statistical testing

Por Suomi, Tomi, Seyednasrollah, Fatemeh, Jaakkola, Maria K., Faux, Thomas, Elo, Laura L.
Publicado no PLoS Comput Biol (2017)

PASI: A novel pathway method to identify delicate group effects

Por Jaakkola, Maria K., McGlinchey, Aidan J., Klén, Riku, Elo, Laura L.
Publicado no PLoS One (2018)

Integrating probe-level expression changes across generations of Affymetrix arrays

Por Elo, Laura L., Lahti, Leo, Skottman, Heli, Kyläniemi, Minna, Lahesmaa, Riitta, Aittokallio, Tero
Publicado em 2005

A predictive model of overall survival in patients with metastatic castration-resistant prostate cancer

Por Mahmoudian, Mehrad, Seyednasrollah, Fatemeh, Koivu, Liisa, Hirvonen, Outi, Jyrkkiö, Sirkku, Elo, Laura L.
Publicado no F1000Res (2019)