TFBScluster web server for the identification of mammalian composite regulatory elements

door Donaldson, Ian J., Göttgens, Berthold
Gepubliceerd in 2006

CoMoDis: composite motif discovery in mammalian genomes

door Donaldson, Ian J., Göttgens, Berthold
Gepubliceerd in 2007

Evolution of candidate transcriptional regulatory motifs since the human-chimpanzee divergence

door Donaldson, Ian J, Göttgens, Berthold
Gepubliceerd in 2006

Sequencing and Characterisation of Rearrangements in Three S. pastorianus Strains Reveals the Presence of Chimeric Genes and Gives Evidence of Breakpoint Reuse

door Hewitt, Sarah K., Donaldson, Ian J., Lovell, Simon C., Delneri, Daniela
Gepubliceerd in 2014

TALE factors use two distinct functional modes to control an essential zebrafish gene expression program

door Ladam, Franck, Stanney, William, Donaldson, Ian J, Yildiz, Ozge, Bobola, Nicoletta, Sagerström, Charles G
Gepubliceerd in eLife (2018)

Overlapping promoter targeting by Elk-1 and other divergent ETS-domain transcription factor family members

door Boros, Joanna, O’Donnell, Amanda, Donaldson, Ian J., Kasza, Aneta, Zeef, Leo, Sharrocks, Andrew D.
Gepubliceerd in 2009

The Forkhead Transcription Factor FOXK2 Promotes AP-1-Mediated Transcriptional Regulation

door Ji, Zongling, Donaldson, Ian J., Liu, Jingru, Hayes, Andrew, Zeef, Leo A. H., Sharrocks, Andrew D.
Gepubliceerd in 2012

The Forkhead Transcription Factor FOXK2 Promotes AP-1-Mediated Transcriptional Regulation

door Ji, Zongling, Donaldson, Ian J., Liu, Jingru, Hayes, Andrew, Zeef, Leo A. H., Sharrocks, Andrew D.
Gepubliceerd in 2014

Analysis of Multiple Genomic Sequence Alignments: A Web Resource, Online Tools, and Lessons Learned From Analysis of Mammalian SCL Loci

door Chapman, Michael A., Donaldson, Ian J., Gilbert, James, Grafham, Darren, Rogers, Jane, Green, Anthony R., Göttgens, Berthold
Gepubliceerd in 2004

Combinatorial action of NF-Y and TALE at embryonic enhancers defines distinct gene expression programs during zygotic genome activation in zebrafish

door Stanney, William, Ladam, Franck, Donaldson, Ian J., Parsons, Teagan J., Maehr, René, Bobola, Nicoletta, Sagerström, Charles G
Gepubliceerd in Dev Biol (2019)

A novel mode of enhancer evolution: The Tal1 stem cell enhancer recruited a MIR element to specifically boost its activity

door Smith, Aileen M., Sanchez, Maria-Jose, Follows, George A., Kinston, Sarah, Donaldson, Ian J., Green, Anthony R., Göttgens, Berthold
Gepubliceerd in 2008

Hypoxia regulates GR function through multiple mechanisms involving microRNAs 103 and 107

door Yang, Nan, Berry, Andrew, Sauer, Carolin, Baxter, Matthew, Donaldson, Ian J., Forbes, Karen, Donn, Rachelle, Matthews, Laura, Ray, David
Gepubliceerd in Mol Cell Endocrinol (2020)

Genome-wide occupancy links Hoxa2 to Wnt–β-catenin signaling in mouse embryonic development

door Donaldson, Ian J., Amin, Shilu, Hensman, James J., Kutejova, Eva, Rattray, Magnus, Lawrence, Neil, Hayes, Andrew, Ward, Christopher M., Bobola, Nicoletta
Gepubliceerd in 2012

Regulation of the BMP Signaling-Responsive Transcriptional Network in the Drosophila Embryo

door Deignan, Lisa, Pinheiro, Marco T., Sutcliffe, Catherine, Saunders, Abbie, Wilcockson, Scott G., Zeef, Leo A. H., Donaldson, Ian J., Ashe, Hilary L.
Gepubliceerd in PLoS Genet (2016)

Genome-wide analysis of repressor element 1 silencing transcription factor/neuron-restrictive silencing factor (REST/NRSF) target genes

door Bruce, Alexander W., Donaldson, Ian J., Wood, Ian C., Yerbury, Sally A., Sadowski, Michael I., Chapman, Michael, Göttgens, Berthold, Buckley, Noel J.
Gepubliceerd in 2004

Hoxa2 Selectively Enhances Meis Binding to Change a Branchial Arch Ground State

door Amin, Shilu, Donaldson, Ian J., Zannino, Denise A., Hensman, James, Rattray, Magnus, Losa, Marta, Spitz, François, Ladam, Franck, Sagerström, Charles, Bobola, Nicoletta
Gepubliceerd in Dev Cell (2015)

eIF2β is critical for eIF5-mediated GDP-dissociation inhibitor activity and translational control

door Jennings, Martin D., Kershaw, Christopher J., White, Christopher, Hoyle, Danielle, Richardson, Jonathan P., Costello, Joseph L., Donaldson, Ian J., Zhou, Yu, Pavitt, Graham D.
Gepubliceerd in Nucleic Acids Res (2016)

A Galaxy-based bioinformatics pipeline for optimised, streamlined microsatellite development from Illumina next-generation sequencing data

door Griffiths, Sarah M., Fox, Graeme, Briggs, Peter J., Donaldson, Ian J., Hood, Simon, Richardson, Pen, Leaver, George W., Truelove, Nathan K., Preziosi, Richard F.
Gepubliceerd in Conserv Genet Resour (2016)

Identification of the REST regulon reveals extensive transposable element-mediated binding site duplication

door Johnson, Rory, Gamblin, Richard J., Ooi, Lezanne, Bruce, Alexander W., Donaldson, Ian J., Westhead, David R., Wood, Ian C., Jackson, Richard M., Buckley, Noel J.
Gepubliceerd in 2006

Elucidation of the ELK1 target gene network reveals a role in the coordinate regulation of core components of the gene regulation machinery

door Boros, Joanna, Donaldson, Ian J., O'Donnell, Amanda, Odrowaz, Zaneta A., Zeef, Leo, Lupien, Mathieu, Meyer, Clifford A., Liu, X. Shirley, Brown, Myles, Sharrocks, Andrew D.
Gepubliceerd in 2009