Expression-Based Network Biology Identifies Alteration in Key Regulatory Pathways of Type 2 Diabetes and Associated Risk/Complications

Por Sengupta, Urmi, Ukil, Sanchaita, Dimitrova, Nevenka, Agrawal, Shipra
Publicado em 2009

Non-Linear Bayesian Framework to Determine the Transcriptional Effects of Cancer-Associated Genomic Aberrations

Por Razi, Abolfazl, Banerjee, Nilanjana, Dimitrova, Nevenka, Varadan, Vinay
Publicado no Conf Proc IEEE Eng Med Biol Soc (2015)

PAPAyA: a platform for breast cancer biomarker signature discovery, evaluation and assessment

Por Janevski, Angel, Kamalakaran, Sitharthan, Banerjee, Nilanjana, Varadan, Vinay, Dimitrova, Nevenka
Publicado em 2009

Effective normalization for copy number variation detection from whole genome sequencing

Por Janevski, Angel, Varadan, Vinay, Kamalakaran, Sitharthan, Banerjee, Nilanjana, Dimitrova, Nevenka
Publicado em 2012

Whole-Genome Sequence Analysis Reveals the Enterovirus D68 Isolates during the United States 2014 Outbreak Mainly Belong to a Novel Clade

Por Huang, Weihua, Wang, Guiqing, Zhuge, Jian, Nolan, Sheila M., Dimitrova, Nevenka, Fallon, John T.
Publicado no Sci Rep (2015)

T2D-Db: An integrated platform to study the molecular basis of Type 2 diabetes

Por Agrawal, Shipra, Dimitrova, Nevenka, Nathan, Prasanthi, Udayakumar, K, Lakshmi, S Sai, Sriram, S, Manjusha, N, Sengupta, Urmi
Publicado em 2008

Major Chromosomal Breakpoint Intervals in Breast Cancer Co-Localize with Differentially Methylated Regions

Por Eric Tang, Man-Hung, Varadan, Vinay, Kamalakaran, Sitharthan, Zhang, Michael Q., Dimitrova, Nevenka, Hicks, James
Publicado em 2012

A Domain Knowledge-Enhanced LSTM-CRF Model for Disease Named Entity Recognition

Por Ling, Yuan, Hasan, Sadid A., Farri, Oladimeji, Chen, Zheng, van Ommering, Rob, Yee, Charles, Dimitrova, Nevenka
Publicado no AMIA Jt Summits Transl Sci Proc (2019)

Optimizing a Whole-Genome Sequencing Data Processing Pipeline for Precision Surveillance of Health Care-Associated Infections

Por Huang, Weihua, Wang, Guiqing, Yin, Changhong, Chen, Donald, Dhand, Abhay, Chanza, Melissa, Dimitrova, Nevenka, Fallon, John T.
Publicado no Microorganisms (2019)

Integrated Genome-Wide Analysis of an Isogenic Pair of Pseudomonas aeruginosa Clinical Isolates with Differential Antimicrobial Resistance to Ceftolozane/Tazobactam, Ceftazidime/Av...

Por Huang, Weihua, Hamouche, Joelle El, Wang, Guiqing, Smith, Melissa, Yin, Changhong, Dhand, Abhay, Dimitrova, Nevenka, Fallon, John T.
Publicado no Int J Mol Sci (2020)

Enterovirus D68 Subclade B3 Strain Circulating and Causing an Outbreak in the United States in 2016

Por Wang, Guiqing, Zhuge, Jian, Huang, Weihua, Nolan, Sheila M., Gilrane, Victoria L., Yin, Changhong, Dimitrova, Nevenka, Fallon, John T.
Publicado no Sci Rep (2017)

1798. Phenotypic and Genotypic Impact of Antibiotic Stewardship Intervention on Daptomycin-Nonsusceptible Enterococcus faecium (DNSE) Clinical Isolates

Por Dhand, Abhay, Lee, Leslie, Feola, Nicholas, Chen, Donald, Dimitrova, Nevenka, Yin, Changhong, Huang, Weihua, Fallon, John, Wang, Guiqing
Publicado no Open Forum Infect Dis (2018)

Translating next generation sequencing to practice: Opportunities and necessary steps

Por Kamalakaran, Sitharthan, Varadan, Vinay, Janevski, Angel, Banerjee, Nilanjana, Tuck, David, McCombie, W. Richard, Dimitrova, Nevenka, Harris, Lyndsay N.
Publicado no Mol Oncol (2013)

Complete Genome Sequences of Four Toxigenic Clostridium difficile Clinical Isolates from Patients of the Lower Hudson Valley, New York, USA

Por Yin, Changhong, Chen, Donald S., Zhuge, Jian, McKenna, Donna, Sagurton, Joan, Wang, Guiqing, Huang, Weihua, Dimitrova, Nevenka, Fallon, John T.
Publicado no Genome Announc (2018)

Global Transcriptome Analysis Identifies a Diagnostic Signature for Early Disseminated Lyme Disease and Its Resolution

Por Petzke, Mary M., Volyanskyy, Konstantin, Mao, Yong, Arevalo, Byron, Zohn, Raphael, Quituisaca, Johanna, Wormser, Gary P., Dimitrova, Nevenka, Schwartz, Ira
Publicado no mBio (2020)

Identification of Tumor Suppressors and Oncogenes from Genomic and Epigenetic Features in Ovarian Cancer

Por Wrzeszczynski, Kazimierz O., Varadan, Vinay, Byrnes, James, Lum, Elena, Kamalakaran, Sitharthan, Levine, Douglas A., Dimitrova, Nevenka, Zhang, Michael Q., Lucito, Robert
Publicado em 2011

Emergence and Evolution of Multidrug-Resistant Klebsiella pneumoniae with both bla(KPC) and bla(CTX-M) Integrated in the Chromosome

Por Huang, Weihua, Wang, Guiqing, Sebra, Robert, Zhuge, Jian, Yin, Changhong, Aguero-Rosenfeld, Maria E., Schuetz, Audrey N., Dimitrova, Nevenka, Fallon, John T.
Publicado no Antimicrob Agents Chemother (2017)

Computational prediction of methylation status in human genomic sequences

Por Das, Rajdeep, Dimitrova, Nevenka, Xuan, Zhenyu, Rollins, Robert A., Haghighi, Fatemah, Edwards, John R., Ju, Jingyue, Bestor, Timothy H., Zhang, Michael Q.
Publicado em 2006

Identification of a Novel Clone, ST736, among Enterococcus faecium Clinical Isolates and Its Association with Daptomycin Nonsusceptibility

Por Wang, Guiqing, Kamalakaran, Sitharthan, Dhand, Abhay, Huang, Weihua, Ojaimi, Caroline, Zhuge, Jian, Yee, Leslie Lee, Mayigowda, Pramod, Surendraiah, Pavan Kumar Makam, Dimitrova, Nevenka, Fallon, John T.
Publicado em 2014

Guidelines for Developing and Reporting Machine Learning Predictive Models in Biomedical Research: A Multidisciplinary View

Por Luo, Wei, Phung, Dinh, Tran, Truyen, Gupta, Sunil, Rana, Santu, Karmakar, Chandan, Shilton, Alistair, Yearwood, John, Dimitrova, Nevenka, Ho, Tu Bao, Venkatesh, Svetha, Berk, Michael
Publicado no J Med Internet Res (2016)