Discovery of the photosynthetic relatives of the "Maltese mushroom" Cynomorium

Por Nickrent, Daniel L, Der, Joshua P, Anderson, Frank E
Publicado em 2005

Transcriptome Analysis Reveals the Same 17 S-Locus F-Box Genes in Two Haplotypes of the Self-Incompatibility Locus of Petunia inflata

Por Williams, Justin S., Der, Joshua P., dePamphilis, Claude W., Kao, Teh-hui
Publicado em 2014

De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum

Por Der, Joshua P, Barker, Michael S, Wickett, Norman J, dePamphilis, Claude W, Wolf, Paul G
Publicado em 2011

Phylogenetic analysis of pectin-related gene families in Physcomitrella patens and nine other plant species yields evolutionary insights into cell walls

Por McCarthy, Thomas W, Der, Joshua P, Honaas, Loren A, dePamphilis, Claude W, Anderson, Charles T
Publicado em 2014

Origin and diversification of wings: Insights from a neopteran insect

Por Medved, Victor, Marden, James H., Fescemyer, Howard W., Der, Joshua P., Liu, Jin, Mahfooz, Najmus, Popadić, Aleksandar
Publicado no Proc Natl Acad Sci U S A (2015)

Origins and diversity of a cosmopolitan fern genus on an island archipelago

Por Wolf, Paul G., Rowe, Carol A., Der, Joshua P., Schilling, Martin P., Visger, Clayton J., Thomson, John A.
Publicado no AoB Plants (2015)

Single-Copy Nuclear Genes Place Haustorial Hydnoraceae within Piperales and Reveal a Cretaceous Origin of Multiple Parasitic Angiosperm Lineages

Por Naumann, Julia, Salomo, Karsten, Der, Joshua P., Wafula, Eric K., Bolin, Jay F., Maass, Erika, Frenzke, Lena, Samain, Marie-Stéphanie, Neinhuis, Christoph, dePamphilis, Claude W., Wanke, Stefan
Publicado em 2013

Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome

Por Honaas, Loren A., Wafula, Eric K., Wickett, Norman J., Der, Joshua P., Zhang, Yeting, Edger, Patrick P., Altman, Naomi S., Pires, J. Chris, Leebens-Mack, James H., dePamphilis, Claude W.
Publicado no PLoS One (2016)

Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae)

Por Naumann, Julia, Der, Joshua P., Wafula, Eric K., Jones, Samuel S., Wagner, Sarah T., Honaas, Loren A., Ralph, Paula E., Bolin, Jay F., Maass, Erika, Neinhuis, Christoph, Wanke, Stefan, dePamphilis, Claude W.
Publicado no Genome Biol Evol (2016)

Functional genomics of a generalist parasitic plant: Laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression

Por Honaas, Loren A, Wafula, Eric K, Yang, Zhenzhen, Der, Joshua P, Wickett, Norman J, Altman, Naomi S, Taylor, Christopher G, Yoder, John I, Timko, Michael P, Westwood, James H, dePamphilis, Claude W
Publicado em 2013

An Exploration into Fern Genome Space

Por Wolf, Paul G., Sessa, Emily B., Marchant, Daniel Blaine, Li, Fay-Wei, Rothfels, Carl J., Sigel, Erin M., Gitzendanner, Matthew A., Visger, Clayton J., Banks, Jo Ann, Soltis, Douglas E., Soltis, Pamela S., Pryer, Kathleen M., Der, Joshua P.
Publicado no Genome Biol Evol (2015)

Comparative Transcriptome Analyses Reveal Core Parasitism Genes and Suggest Gene Duplication and Repurposing as Sources of Structural Novelty

Por Yang, Zhenzhen, Wafula, Eric K., Honaas, Loren A., Zhang, Huiting, Das, Malay, Fernandez-Aparicio, Monica, Huang, Kan, Bandaranayake, Pradeepa C.G., Wu, Biao, Der, Joshua P., Clarke, Christopher R., Ralph, Paula E., Landherr, Lena, Altman, Naomi S., Timko, Michael P., Yoder, John I., Westwood, James H., dePamphilis, Claude W.
Publicado no Mol Biol Evol (2015)

Between Two Fern Genomes

Por Sessa, Emily B, Banks, Jo Ann, Barker, Michael S, Der, Joshua P, Duffy, Aaron M, Graham, Sean W, Hasebe, Mitsuyasu, Langdale, Jane, Li, Fay-Wei, Marchant, D Blaine, Pryer, Kathleen M, Rothfels, Carl J, Roux, Stanley J, Salmi, Mari L, Sigel, Erin M, Soltis, Douglas E, Soltis, Pamela S, Stevenson, Dennis W, Wolf, Paul G
Publicado em 2014

The butterfly plant arms-race escalated by gene and genome duplications

Por Edger, Patrick P., Heidel-Fischer, Hanna M., Bekaert, Michaël, Rota, Jadranka, Glöckner, Gernot, Platts, Adrian E., Heckel, David G., Der, Joshua P., Wafula, Eric K., Tang, Michelle, Hofberger, Johannes A., Smithson, Ann, Hall, Jocelyn C., Blanchette, Matthieu, Bureau, Thomas E., Wright, Stephen I., dePamphilis, Claude W., Eric Schranz, M., Barker, Michael S., Conant, Gavin C., Wahlberg, Niklas, Vogel, Heiko, Pires, J. Chris, Wheat, Christopher W.
Publicado no Proc Natl Acad Sci U S A (2015)

Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns

Por Li, Fay-Wei, Villarreal, Juan Carlos, Kelly, Steven, Rothfels, Carl J., Melkonian, Michael, Frangedakis, Eftychios, Ruhsam, Markus, Sigel, Erin M., Der, Joshua P., Pittermann, Jarmila, Burge, Dylan O., Pokorny, Lisa, Larsson, Anders, Chen, Tao, Weststrand, Stina, Thomas, Philip, Carpenter, Eric, Zhang, Yong, Tian, Zhijian, Chen, Li, Yan, Zhixiang, Zhu, Ying, Sun, Xiao, Wang, Jun, Stevenson, Dennis W., Crandall-Stotler, Barbara J., Shaw, A. Jonathan, Deyholos, Michael K., Soltis, Douglas E., Graham, Sean W., Windham, Michael D., Langdale, Jane A., Wong, Gane Ka-Shu, Mathews, Sarah, Pryer, Kathleen M.
Publicado em 2014

Phylotranscriptomic analysis of the origin and early diversification of land plants

Por Wickett, Norman J., Mirarab, Siavash, Nguyen, Nam, Warnow, Tandy, Carpenter, Eric, Matasci, Naim, Ayyampalayam, Saravanaraj, Barker, Michael S., Burleigh, J. Gordon, Gitzendanner, Matthew A., Ruhfel, Brad R., Wafula, Eric, Der, Joshua P., Graham, Sean W., Mathews, Sarah, Melkonian, Michael, Soltis, Douglas E., Soltis, Pamela S., Miles, Nicholas W., Rothfels, Carl J., Pokorny, Lisa, Shaw, A. Jonathan, DeGironimo, Lisa, Stevenson, Dennis W., Surek, Barbara, Villarreal, Juan Carlos, Roure, Béatrice, Philippe, Hervé, dePamphilis, Claude W., Chen, Tao, Deyholos, Michael K., Baucom, Regina S., Kutchan, Toni M., Augustin, Megan M., Wang, Jun, Zhang, Yong, Tian, Zhijian, Yan, Zhixiang, Wu, Xiaolei, Sun, Xiao, Wong, Gane Ka-Shu, Leebens-Mack, James
Publicado no Proc Natl Acad Sci U S A (2014)

Data access for the 1,000 Plants (1KP) project

Por Matasci, Naim, Hung, Ling-Hong, Yan, Zhixiang, Carpenter, Eric J, Wickett, Norman J, Mirarab, Siavash, Nguyen, Nam, Warnow, Tandy, Ayyampalayam, Saravanaraj, Barker, Michael, Burleigh, J Gordon, Gitzendanner, Matthew A, Wafula, Eric, Der, Joshua P, dePamphilis, Claude W, Roure, Béatrice, Philippe, Hervé, Ruhfel, Brad R, Miles, Nicholas W, Graham, Sean W, Mathews, Sarah, Surek, Barbara, Melkonian, Michael, Soltis, Douglas E, Soltis, Pamela S, Rothfels, Carl, Pokorny, Lisa, Shaw, Jonathan A, DeGironimo, Lisa, Stevenson, Dennis W, Villarreal, Juan Carlos, Chen, Tao, Kutchan, Toni M, Rolf, Megan, Baucom, Regina S, Deyholos, Michael K, Samudrala, Ram, Tian, Zhijian, Wu, Xiaolei, Sun, Xiao, Zhang, Yong, Wang, Jun, Leebens-Mack, Jim, Wong, Gane Ka-Shu
Publicado no Gigascience (2014)

Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)

Por Ming, Ray, VanBuren, Robert, Liu, Yanling, Yang, Mei, Han, Yuepeng, Li, Lei-Ting, Zhang, Qiong, Kim, Min-Jeong, Schatz, Michael C, Campbell, Michael, Li, Jingping, Bowers, John E, Tang, Haibao, Lyons, Eric, Ferguson, Ann A, Narzisi, Giuseppe, Nelson, David R, Blaby-Haas, Crysten E, Gschwend, Andrea R, Jiao, Yuannian, Der, Joshua P, Zeng, Fanchang, Han, Jennifer, Min, Xiang Jia, Hudson, Karen A, Singh, Ratnesh, Grennan, Aleel K, Karpowicz, Steven J, Watling, Jennifer R, Ito, Kikukatsu, Robinson, Sharon A, Hudson, Matthew E, Yu, Qingyi, Mockler, Todd C, Carroll, Andrew, Zheng, Yun, Sunkar, Ramanjulu, Jia, Ruizong, Chen, Nancy, Arro, Jie, Wai, Ching Man, Wafula, Eric, Spence, Ashley, Han, Yanni, Xu, Liming, Zhang, Jisen, Peery, Rhiannon, Haus, Miranda J, Xiong, Wenwei, Walsh, James A, Wu, Jun, Wang, Ming-Li, Zhu, Yun J, Paull, Robert E, Britt, Anne B, Du, Chunguang, Downie, Stephen R, Schuler, Mary A, Michael, Todd P, Long, Steve P, Ort, Donald R, William Schopf, J, Gang, David R, Jiang, Ning, Yandell, Mark, dePamphilis, Claude W, Merchant, Sabeeha S, Paterson, Andrew H, Buchanan, Bob B, Li, Shaohua, Shen-Miller, Jane
Publicado em 2013