Phylogenetic analysis of pectin-related gene families in Physcomitrella patens and nine other plant species yields evolutionary insights into cell walls

Por McCarthy, Thomas W, Der, Joshua P, Honaas, Loren A, dePamphilis, Claude W, Anderson, Charles T
Publicado em 2014

Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome

Por Honaas, Loren A., Wafula, Eric K., Wickett, Norman J., Der, Joshua P., Zhang, Yeting, Edger, Patrick P., Altman, Naomi S., Pires, J. Chris, Leebens-Mack, James H., dePamphilis, Claude W.
Publicado no PLoS One (2016)

Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic Plant Hydnora visseri (Hydnoraceae)

Por Naumann, Julia, Der, Joshua P., Wafula, Eric K., Jones, Samuel S., Wagner, Sarah T., Honaas, Loren A., Ralph, Paula E., Bolin, Jay F., Maass, Erika, Neinhuis, Christoph, Wanke, Stefan, dePamphilis, Claude W.
Publicado no Genome Biol Evol (2016)

Functional genomics of a generalist parasitic plant: Laser microdissection of host-parasite interface reveals host-specific patterns of parasite gene expression

Por Honaas, Loren A, Wafula, Eric K, Yang, Zhenzhen, Der, Joshua P, Wickett, Norman J, Altman, Naomi S, Taylor, Christopher G, Yoder, John I, Timko, Michael P, Westwood, James H, dePamphilis, Claude W
Publicado em 2013

Evolution of a horizontally acquired legume gene, albumin 1, in the parasitic plant Phelipanche aegyptiaca and related species

Por Zhang, Yeting, Fernandez-Aparicio, Monica, Wafula, Eric K, Das, Malay, Jiao, Yuannian, Wickett, Norman J, Honaas, Loren A, Ralph, Paula E, Wojciechowski, Martin F, Timko, Michael P, Yoder, John I, Westwood, James H, dePamphilis, Claude W
Publicado em 2013

Horizontal gene transfer is more frequent with increased heterotrophy and contributes to parasite adaptation

Por Yang, Zhenzhen, Zhang, Yeting, Wafula, Eric K., Honaas, Loren A., Ralph, Paula E., Jones, Sam, Clarke, Christopher R., Liu, Siming, Su, Chun, Zhang, Huiting, Altman, Naomi S., Schuster, Stephan C., Timko, Michael P., Yoder, John I., Westwood, James H., dePamphilis, Claude W.
Publicado no Proc Natl Acad Sci U S A (2016)

Comparative Transcriptome Analyses Reveal Core Parasitism Genes and Suggest Gene Duplication and Repurposing as Sources of Structural Novelty

Por Yang, Zhenzhen, Wafula, Eric K., Honaas, Loren A., Zhang, Huiting, Das, Malay, Fernandez-Aparicio, Monica, Huang, Kan, Bandaranayake, Pradeepa C.G., Wu, Biao, Der, Joshua P., Clarke, Christopher R., Ralph, Paula E., Landherr, Lena, Altman, Naomi S., Timko, Michael P., Yoder, John I., Westwood, James H., dePamphilis, Claude W.
Publicado no Mol Biol Evol (2015)