Role of LDB1 in the transition from chromatin looping to transcription activation

Por Krivega, Ivan, Dale, Ryan K., Dean, Ann
Publicado em 2014

Pybedtools: a flexible Python library for manipulating genomic datasets and annotations

Por Dale, Ryan K., Pedersen, Brent S., Quinlan, Aaron R.
Publicado em 2011

Shep regulates Drosophila neuronal remodeling by controlling transcription of its chromatin targets

Por Chen, Dahong, Dale, Ryan K., Lei, Elissa P.
Publicado no Development (2018)

Messenger RNA is a functional component of a chromatin insulator complex

Por Matzat, Leah H, Dale, Ryan K, Lei, Elissa P
Publicado em 2013

metaseq: a Python package for integrative genome-wide analysis reveals relationships between chromatin insulators and associated nuclear mRNA

Por Dale, Ryan K., Matzat, Leah H., Lei, Elissa P.
Publicado em 2014

The LDB1 complex co-opts CTCF for erythroid lineage specific long-range enhancer interactions

Por Lee, Jongjoo, Krivega, Ivan, Dale, Ryan K., Dean, Ann
Publicado no Cell Rep (2017)

Argonaute2 attenuates active transcription by limiting RNA Polymerase II elongation in Drosophila melanogaster

Por Nazer, Ezequiel, Dale, Ryan K., Palmer, Cameron, Lei, Elissa P.
Publicado no Sci Rep (2018)

CTCF-mediated transcriptional regulation through cell type-specific chromosome organization in the β-globin locus

Por Junier, Ivan, Dale, Ryan K., Hou, Chunhui, Képès, François, Dean, Ann
Publicado em 2012

Tissue-Specific Regulation of Chromatin Insulator Function

Por Matzat, Leah H., Dale, Ryan K., Moshkovich, Nellie, Lei, Elissa P.
Publicado em 2012

Argonaute2 and LaminB modulate gene expression by controlling chromatin topology

Por Nazer, Ezequiel, Dale, Ryan K., Chinen, Madoka, Radmanesh, Behram, Lei, Elissa P.
Publicado no PLoS Genet (2018)

Genome-wide localization of exosome components to active promoters and chromatin insulators in Drosophila

Por Lim, Su Jun, Boyle, Patrick J., Chinen, Madoka, Dale, Ryan K., Lei, Elissa P.
Publicado em 2013

The RNA-binding protein Rumpelstiltskin antagonizes gypsy chromatin insulator function in a tissue-specific manner

Por King, Matthew R., Matzat, Leah H., Dale, Ryan K., Lim, Su Jun, Lei, Elissa P.
Publicado em 2014

RNAi-independent role for Argonaute2 in CTCF/CP190 chromatin insulator function

Por Moshkovich, Nellie, Nisha, Parul, Boyle, Patrick J., Thompson, Brandi A., Dale, Ryan K., Lei, Elissa P.
Publicado em 2011

Distinct Ldb1/NLI complexes orchestrate γ-globin repression and reactivation through ETO2 in human adult erythroid cells

Por Kiefer, Christine M., Lee, Jongjoo, Hou, Chunhui, Dale, Ryan K., Lee, Y. Terry, Meier, Emily R., Miller, Jeffrey L., Dean, Ann
Publicado em 2011

Mediation of Drosophila autosomal dosage effects and compensation by network interactions

Por Malone, John H, Cho, Dong-Yeon, Mattiuzzo, Nicolas R, Artieri, Carlo G, Jiang, Lichun, Dale, Ryan K, Smith, Harold E, McDaniel, Jennifer, Munro, Sarah, Salit, Marc, Andrews, Justen, Przytycka, Teresa M, Oliver, Brian
Publicado em 2012

A compendium of RNA-binding motifs for decoding gene regulation

Por Ray, Debashish, Kazan, Hilal, Cook, Kate B., Weirauch, Matthew T., Najafabadi, Hamed S., Li, Xiao, Gueroussov, Serge, Albu, Mihai, Zheng, Hong, Yang, Ally, Na, Hong, Irimia, Manuel, Matzat, Leah H., Dale, Ryan K., Smith, Sarah A., Yarosh, Christopher A., Kelly, Seth M., Nabet, Behnam, Mecenas, Desirea, Li, Weimin, Laishram, Rakesh S., Qiao, Mei, Lipshitz, Howard D., Piano, Fabio, Corbett, Anita H., Carstens, Russ P., Frey, Brendan J., Anderson, Richard A., Lynch, Kristen W., Penalva, Luiz O. F., Lei, Elissa P., Fraser, Andrew G., Blencowe, Benjamin J., Morris, Quaid D., Hughes, Timothy R.
Publicado em 2013