VCF-kit: assorted utilities for the variant call format

Por Cook, Daniel E, Andersen, Erik C
Publicado no Bioinformatics (2017)

CeNDR, the Caenorhabditis elegans natural diversity resource

Por Cook, Daniel E., Zdraljevic, Stefan, Roberts, Joshua P., Andersen, Erik C.
Publicado no Nucleic Acids Res (2017)

Clinical and Environmental Influences on Metabolic Biomarkers Collected for Newborn Screening

Por Ryckman, Kelli K., Berberich, Stanton L., Shchelochkov, Oleg A., Cook, Daniel E, Murray, Jeffrey C.
Publicado em 2012

Natural variation in a single amino acid substitution underlies physiological responses to topoisomerase II poisons

Por Zdraljevic, Stefan, Strand, Christine, Seidel, Hannah S., Cook, Daniel E., Doench, John G., Andersen, Erik C.
Publicado no PLoS Genet (2017)

Long-read sequencing reveals intra-species tolerance of substantial structural variations and new subtelomere formation in C. elegans

Por Kim, Chuna, Kim, Jun, Kim, Sunghyun, Cook, Daniel E., Evans, Kathryn S., Andersen, Erik C., Lee, Junho
Publicado no Genome Res (2019)

Discovery of genomic intervals that underlie nematode responses to benzimidazoles

Por Zamanian, Mostafa, Cook, Daniel E., Zdraljevic, Stefan, Brady, Shannon C., Lee, Daehan, Lee, Junho, Andersen, Erik C.
Publicado no PLoS Negl Trop Dis (2018)

The influence of maternal disease on metabolites measured as part of newborn screening

Por Ryckman, Kelli K, Shchelochkov, Oleg A, Cook, Daniel E, Berberich, Stanton L., Copeland, Sara, Dagle, John M, Murray, Jeffrey C
Publicado em 2013

A Novel Gene Underlies Bleomycin-Response Variation in Caenorhabditis elegans

Por Brady, Shannon C., Zdraljevic, Stefan, Bisaga, Karol W., Tanny, Robyn E., Cook, Daniel E., Lee, Daehan, Wang, Ye, Andersen, Erik C.
Publicado no Genetics (2019)

Shared Genomic Regions Underlie Natural Variation in Diverse Toxin Responses

Por Evans, Kathryn S., Brady, Shannon C., Bloom, Joshua S., Tanny, Robyn E., Cook, Daniel E., Giuliani, Sarah E., Hippleheuser, Stephen W., Zamanian, Mostafa, Andersen, Erik C.
Publicado no Genetics (2018)

Replication of clinical associations with 17-hydroxyprogesterone in preterm newborns

Por Ryckman, Kelli K, Cook, Daniel E, Berberich, Stanton L., Shchelochkov, Oleg A, Copeland, Sara, Berends, Susan K, Busch, Tamara, Dagle, John M, Murray, Jeffrey C
Publicado em 2012

DYRK1A controls the transition from proliferation to quiescence during lymphoid development by destabilizing Cyclin D3

Por Thompson, Benjamin J., Bhansali, Rahul, Diebold, Lauren, Cook, Daniel E., Stolzenburg, Lindsay, Casagrande, Anne-Sophie, Besson, Thierry, Leblond, Bertrand, Désiré, Laurent, Malinge, Sébastien, Crispino, John D.
Publicado no J Exp Med (2015)

Population Selection and Sequencing of Caenorhabditis elegans Wild Isolates Identifies a Region on Chromosome III Affecting Starvation Resistance

Por Webster, Amy K., Hung, Anthony, Moore, Brad T., Guzman, Ryan, Jordan, James M., Kaplan, Rebecca E. W., Hibshman, Jonathan D., Tanny, Robyn E., Cook, Daniel E., Andersen, Erik, Baugh, L. Ryan
Publicado no G3 (Bethesda) (2019)

Selection and gene flow shape niche-associated variation in pheromone response

Por Lee, Daehan, Zdraljevic, Stefan, Cook, Daniel E., Frézal, Lise, Hsu, Jung-Chen, Sterken, Mark G., Riksen, Joost A.G., Wang, John, Kammenga, Jan E., Braendle, Christian, Félix, Marie-Anne, Schroeder, Frank C., Andersen, Erik C.
Publicado no Nat Ecol Evol (2019)

Deep sampling of Hawaiian Caenorhabditis elegans reveals high genetic diversity and admixture with global populations

Por Crombie, Tim A, Zdraljevic, Stefan, Cook, Daniel E, Tanny, Robyn E, Brady, Shannon C, Wang, Ye, Evans, Kathryn S, Hahnel, Steffen, Lee, Daehan, Rodriguez, Briana C, Zhang, Gaotian, van der Zwagg, Joost, Kiontke, Karin, Andersen, Erik C
Publicado no eLife (2019)

The Genetic Basis of Natural Variation in Caenorhabditis elegans Telomere Length

Por Cook, Daniel E., Zdraljevic, Stefan, Tanny, Robyn E., Seo, Beomseok, Riccardi, David D., Noble, Luke M., Rockman, Matthew V., Alkema, Mark J., Braendle, Christian, Kammenga, Jan E., Wang, John, Kruglyak, Leonid, Félix, Marie-Anne, Lee, Junho, Andersen, Erik C.
Publicado no Genetics (2016)