The Killer-cell Immunoglobulin-like Receptors of Macaques

Tekijä Bimber, Benjamin N., Evans, David T.
Julkaisussa Immunol Rev (2015)

VariantQC: a visual quality control report for variant evaluation

Tekijä Yan, Melissa Y, Ferguson, Betsy, Bimber, Benjamin N
Julkaisussa Bioinformatics (2019)

mGAP: the macaque genotype and phenotype resource, a framework for accessing and interpreting macaque variant data, and identifying new models of human disease

Tekijä Bimber, Benjamin N., Yan, Melissa Y., Peterson, Samuel M., Ferguson, Betsy
Julkaisussa BMC Genomics (2019)

Complete Characterization of Killer Ig-Like Receptor (KIR) Haplotypes in Mauritian Cynomolgus Macaques: Novel Insights into Nonhuman Primate KIR Gene Content and Organization

Tekijä Bimber, Benjamin N., Moreland, Anna J., Wiseman, Roger W., Hughes, Austin L., O'Connor, David H.
Julkaistu 2008

Dynamics of Haplotype Frequency Change in a CD8+TL Epitope of Simian Immunodeficiency Virus

Tekijä Hughes, Austin L., O’Connor, Shelby, Dudley, Dawn M., Burwitz, Benjamin J., Bimber, Benjamin N., O’Connor, David
Julkaistu 2010

Whole Genome Sequencing Predicts Novel Human Disease Models in Rhesus Macaques

Tekijä Bimber, Benjamin N., Ramakrishnan, Ranjani, Cervera-Juanes, Rita, Madhira, Ravi, Peterson, Samuel M, Norgren, Robert B., Ferguson, Betsy
Julkaisussa Genomics (2017)

Nef gene evolution from a single transmitted strain in acute SIV infection

Tekijä Bimber, Benjamin N, Chugh, Pauline, Giorgi, Elena E, Kim, Baek, Almudevar, Anthony L, Dewhurst, Stephen, O'Connor, David H, Lee, Ha Youn
Julkaistu 2009

Identification of novel MHC class I sequences in pig-tailed macaques by amplicon pyrosequencing and full-length cDNA cloning and sequencing

Tekijä O’Leary, Claire E., Wiseman, Roger W., Karl, Julie A., Bimber, Benjamin N., Lank, Simon M., Tuscher, Jennifer J., O’Connor, David H.
Julkaistu 2009

Ultradeep Pyrosequencing Detects Complex Patterns of CD8(+) T-Lymphocyte Escape in Simian Immunodeficiency Virus-Infected Macaques

Tekijä Bimber, Benjamin N., Burwitz, Benjamin J., O'Connor, Shelby, Detmer, Ann, Gostick, Emma, Lank, Simon M., Price, David A., Hughes, Austin, O'Connor, David
Julkaistu 2009

Characterization of killer immunoglobulin-like receptor genetics and comprehensive genotyping by pyrosequencing in rhesus macaques

Tekijä Moreland, Anna J, Guethlein, Lisbeth A, Reeves, R Keith, Broman, Karl W, Johnson, R Paul, Parham, Peter, O'Connor, David H, Bimber, Benjamin N
Julkaistu 2011

KIR Polymorphisms Modulate Peptide-Dependent Binding to an MHC Class I Ligand with a Bw6 Motif

Tekijä Colantonio, Arnaud D., Bimber, Benjamin N., Neidermyer, William J., Reeves, R. Keith, Alter, Galit, Altfeld, Marcus, Johnson, R. Paul, Carrington, Mary, O'Connor, David H., Evans, David T.
Julkaistu 2011

Pyrosequencing Reveals Restricted Patterns of CD8(+) T Cell Escape-Associated Compensatory Mutations in Simian Immunodeficiency Virus

Tekijä Burwitz, Benjamin J., Sacha, Jonah B., Reed, Jason S., Newman, Laura P., Norante, Francesca A., Bimber, Benjamin N., Wilson, Nancy A., Watkins, David I., O'Connor, David H.
Julkaistu 2011

Low-Cost Ultra-Wide Genotyping Using Roche/454 Pyrosequencing for Surveillance of HIV Drug Resistance

Tekijä Dudley, Dawn M., Chin, Emily N., Bimber, Benjamin N., Sanabani, Sabri S., Tarosso, Leandro F., Costa, Priscilla R., Sauer, Mariana M., Kallas, Esper G., O.’Connor, David H.
Julkaistu 2012

Characterization of 47 MHC class I sequences in Filipino cynomolgus macaques

Tekijä Campbell, Kevin J., Detmer, Ann M., Karl, Julie A., Wiseman, Roger W., Blasky, Alex J., Hughes, Austin L., Bimber, Benjamin N., O’Connor, Shelby L., O’Connor, David H.
Julkaistu 2008

Whole-genome characterization in pedigreed non-human primates using genotyping-by-sequencing (GBS) and imputation

Tekijä Bimber, Benjamin N., Raboin, Michael J., Letaw, John, Nevonen, Kimberly A., Spindel, Jennifer E., McCouch, Susan R., Cervera-Juanes, Rita, Spindel, Eliot, Carbone, Lucia, Ferguson, Betsy, Vinson, Amanda
Julkaisussa BMC Genomics (2016)

Characterization of full-length MHC class II sequences in Indonesian and Vietnamese cynomolgus macaques

Tekijä Creager, Hannah M, Becker, Ericka A., Sandman, Kelly K., Karl, Julie A., Lank, Simon M., Bimber, Benjamin N., Wiseman, Roger W., Hughes, Austin L, O’Connor, Shelby L., O’Connor, David H.
Julkaistu 2011

Acute Phase CD8+ T Lymphocytes against Alternate Reading Frame Epitopes Select for Rapid Viral Escape during SIV Infection

Tekijä Walsh, Andrew D., Bimber, Benjamin N., Das, Arpita, Piaskowski, Shari M., Rakasz, Eva G., Bean, Alexander T., Mudd, Philip A., Ericsen, Adam J., Wilson, Nancy A., Hughes, Austin L., O'Connor, David H., Maness, Nicholas J.
Julkaistu 2013

Nomenclature for the KIR of non-human species

Tekijä Robinson, James, Guethlein, Lisbeth A., Maccari, Giuseppe, Blokhuis, Jeroen, Bimber, Benjamin N., de Groot, Natasja G., Sanderson, Nicholas D., Abi-Rached, Laurent, Walter, Lutz, Bontrop, Ronald E., Hammond, John A., Marsh, Steven G. E., Parham, Peter
Julkaisussa Immunogenetics (2018)

Simian Immunodeficiency Virus SIVmac239Δnef Vaccination Elicits Different Tat(28-35)SL8-Specific CD8(+) T-Cell Clonotypes Compared to a DNA Prime/Adenovirus Type 5 Boost Regimen in...

Tekijä Burwitz, Benjamin J., Ende, Zachary, Sudolcan, Benjamin, Reynolds, Matthew R., Greene, Justin M., Bimber, Benjamin N., Almeida, Jorge R., Kurniawan, Monica, Venturi, Vanessa, Gostick, Emma, Wiseman, Roger W., Douek, Daniel C., Price, David A., O'Connor, David H.
Julkaistu 2011

MHC genotyping with massively parallel pyrosequencing

Tekijä Wiseman, Roger W., Karl, Julie A., Bimber, Benjamin N., O’Leary, Claire E., Lank, Simon M., Tuscher, Jennifer J., Detmer, Ann M., Bouffard, Pascal, Levenkova, Natalya, Turcotte, Cynthia L., Szekeres, Edward, Wright, Chris, Harkins, Timothy, O’Connor, David H.
Julkaistu 2009