Leading the way: finding genes for neurologic disease in dogs using genome-wide mRNA sequencing

av Ostrander Elaine A, Beale Holly C
Publicerad 2012-07-01

Leading the way: finding genes for neurologic disease in dogs using genome-wide mRNA sequencing

av Ostrander, Elaine A, Beale, Holly C
Publicerad 2012

Bayesian Framework for Detecting Gene Expression Outliers in Individual Samples

av Vivian, John, Eizenga, Jordan M., Beale, Holly C., Vaske, Olena M., Paten, Benedict
I publikationen JCO Clin Cancer Inform (2020)

Whole genome sequencing in cats, identifies new models for blindness in AIPL1 and somite segmentation in HES7

av Lyons, Leslie A., Creighton, Erica K., Alhaddad, Hasan, Beale, Holly C., Grahn, Robert A., Rah, HyungChul, Maggs, David J., Helps, Christopher R., Gandolfi, Barbara
I publikationen BMC Genomics (2016)

Derived variants at six genes explain nearly half of size reduction in dog breeds

av Rimbault, Maud, Beale, Holly C., Schoenebeck, Jeffrey J., Hoopes, Barbara C., Allen, Jeremy J., Kilroy-Glynn, Paul, Wayne, Robert K., Sutter, Nathan B., Ostrander, Elaine A.
Publicerad 2013

Barriers to accessing public cancer genomic data

av Learned, Katrina, Durbin, Ann, Currie, Robert, Kephart, Ellen Towle, Beale, Holly C., Sanders, Lauren M., Pfeil, Jacob, Goldstein, Theodore C., Salama, Sofie R., Haussler, David, Vaske, Olena Morozova, Bjork, Isabel M.
I publikationen Sci Data (2019)

Identification of a differentiation stall in epithelial mesenchymal transition in histone H3–mutant diffuse midline glioma

av Sanders, Lauren M, Cheney, Allison, Seninge, Lucas, van den Bout, Anouk, Chen, Marissa, Beale, Holly C, Kephart, Ellen Towle, Pfeil, Jacob, Learned, Katrina, Lyle, A Geoffrey, Bjork, Isabel, Haussler, David, Salama, Sofie R, Vaske, Olena M
I publikationen Gigascience (2020)

Variation of BMP3 Contributes to Dog Breed Skull Diversity

av Schoenebeck, Jeffrey J., Hutchinson, Sarah A., Byers, Alexandra, Beale, Holly C., Carrington, Blake, Faden, Daniel L., Rimbault, Maud, Decker, Brennan, Kidd, Jeffrey M., Sood, Raman, Boyko, Adam R., Fondon, John W., Wayne, Robert K., Bustamante, Carlos D., Ciruna, Brian, Ostrander, Elaine A.
Publicerad 2012

The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets

av Beale, Holly C, Roger, Jacquelyn M, Cattle, Matthew A, McKay, Liam T, Thompson, Drew K A, Learned, Katrina, Lyle, A Geoffrey, Kephart, Ellen T, Currie, Rob, Lam, Du Linh, Sanders, Lauren, Pfeil, Jacob, Vivian, John, Bjork, Isabel, Salama, Sofie R, Haussler, David, Vaske, Olena M
I publikationen Gigascience (2021)

Hydra: A mixture modeling framework for subtyping pediatric cancer cohorts using multimodal gene expression signatures

av Pfeil, Jacob, Sanders, Lauren M., Anastopoulos, Ioannis, Lyle, A. Geoffrey, Weinstein, Alana S., Xue, Yuanqing, Blair, Andrew, Beale, Holly C., Lee, Alex, Leung, Stanley G., Dinh, Phuong T., Shah, Avanthi Tayi, Breese, Marcus R., Devine, W. Patrick, Bjork, Isabel, Salama, Sofie R., Sweet-Cordero, E. Alejandro, Haussler, David, Vaske, Olena Morozova
I publikationen PLoS Comput Biol (2020)

Comparative RNA-seq analysis aids in diagnosis of a rare pediatric tumor

av Sanders, Lauren M., Rangaswami, Arun, Bjork, Isabel, Lam, Du Linh, Beale, Holly C., Kephart, Ellen Towle, Durbin, Ann, Learned, Katrina, Currie, Rob, Lyle, A. Geoffrey, Pfeil, Jacob, Shah, Avanthi Tayi, Lee, Alex G., Leung, Stanley G., Behroozfard, Inge H., Breese, Marcus R., Peralez, Jennifer, Hazard, Florette K., Lacayo, Norman, Spunt, Sheri L., Haussler, David, Salama, Sofie R., Sweet-Cordero, E. Alejandro, Vaske, Olena M.
I publikationen Cold Spring Harb Mol Case Stud (2019)

Precision Medicine in Cats: Novel Niemann‐Pick Type C1 Diagnosed by Whole‐Genome Sequencing

av Mauler, D.A., Gandolfi, B., Reinero, C.R., O'Brien, D.P., Spooner, J.L., Lyons, L.A., Aberdein, Danielle, Alves, Paulo C., Barsh, Gregory S., Beale, Holly C., Boyko, Adam R., Brockman, Jeffrey A., Castelhano, Marta G., Chan, Patricia P., Matthew Ellinwood, N., Fogle, Jonathan E., Garrick, Dorian J., Helps, Christopher R., Hytönen, Marjo K., Kaukonen, Maria, Kaelin, Christopher B., Leclerc, Emilie, Leeb, Tosso, Lohi, Hannes, Longeri, Maria, Malik, Richard, Montague, Michael J., Munday, John S., Murphy, William J., Pedersen, Niels C., Rothschild, Max F., Stern, Joshua A., Swanson, William F., Terio, Karen A., Todhunter, Rory J., Ueda, Yu, Warren, Wesley C., Wilcox, Elizabeth A., Wildschutte, Julia H.
I publikationen J Vet Intern Med (2017)