5C-ID: Increased resolution Chromosome-Conformation-Capture-Carbon-Copy with in situ 3C and double alternating primer design

Por Kim, Ji Hun, Titus, Katelyn R., Gong, Wanfeng, Beagan, Jonathan A., Cao, Zhendong, Phillips-Cremins, Jennifer E.
Publicado no Methods (2018)

YY1 and CTCF orchestrate a 3D chromatin looping switch during early neural lineage commitment

Por Beagan, Jonathan A., Duong, Michael T., Titus, Katelyn R., Zhou, Linda, Cao, Zhendong, Ma, Jingjing, Lachanski, Caroline V., Gillis, Daniel R., Phillips-Cremins, Jennifer E.
Publicado no Genome Res (2017)

A Nurr1 Agonist Causes Neuroprotection in a Parkinson’s Disease Lesion Model Primed with the Toll-Like Receptor 3 dsRNA Inflammatory Stimulant Poly(I:C)

Por Smith, Gaynor A., Rocha, Emily M., Rooney, Thomas, Barneoud, Pascal, McLean, Jesse R., Beagan, Jonathan, Osborn, Teresia, Coimbra, Madeleine, Luo, Yongyi, Hallett, Penelope J., Isacson, Ole
Publicado no PLoS One (2015)

Disease-associated short tandem repeats co-localize with chromatin domain boundaries

Por Sun, James H., Zhou, Linda, Emerson, Daniel J., Phyo, Sai, Titus, Katelyn R., Gong, Wanfeng, Gilgenast, Thomas G., Beagan, Jonathan A., Davidson, Beverly L., Tassone, Flora, Phillips-Cremins, Jennifer E.
Publicado no Cell (2018)

Sustained Systemic Glucocerebrosidase Inhibition Induces Brain α-Synuclein Aggregation, Microglia and Complement C1q Activation in Mice

Por Rocha, Emily M., Smith, Gaynor A., Park, Eric, Cao, Hongmei, Graham, Anne-Renee, Brown, Eilish, McLean, Jesse R., Hayes, Melissa A., Beagan, Jonathan, Izen, Sarah C., Perez-Torres, Eduardo, Hallett, Penelope J., Isacson, Ole
Publicado no Antioxid Redox Signal (2015)

Local genome topology can exhibit an incompletely rewired 3D-folding state during somatic cell reprogramming

Por Beagan, Jonathan A., Gilgenast, Thomas G., Kim, Jesi, Plona, Zachary, Norton, Heidi K., Hu, Gui, Hsu, Sarah C., Shields, Emily J., Lyu, Xiaowen, Apostolou, Effie, Hochedlinger, Konrad, Corces, Victor G., Dekker, Job, Phillips-Cremins, Jennifer E.
Publicado no Cell Stem Cell (2016)