A pipeline for local assembly of minisatellite alleles from single-molecule sequencing data

Por Ogeh, Denye, Badge, Richard
Publicado no Bioinformatics (2017)

Genome-wide amplification of proviral sequences reveals new polymorphic HERV-K(HML-2) proviruses in humans and chimpanzees that are absent from genome assemblies

Por Macfarlane, Catriona M, Badge, Richard M
Publicado no Retrovirology (2015)

IAP Display: A Simple Method to Identify Mouse Strain Specific IAP Insertions

Por Ray, Akshay, Rahbari, Raheleh, Badge, Richard M.
Publicado em 2010

ATLAS: A System to Selectively Identify Human-Specific L1 Insertions

Por Badge, Richard M., Alisch, Reid S., Moran, John V.
Publicado em 2003

A YY1-binding site is required for accurate human LINE-1 transcription initiation

Por Athanikar, Jyoti N., Badge, Richard M., Moran, John V.
Publicado em 2004

Exonization of active mouse L1s: a driver of transcriptome evolution?

Por Badge Richard, Dandekar Thomas, Schultz Jörg, Penzkofer Tobias, Zemojtel Tomasz, Vingron Martin
Publicado em 2007-10-01

Exonization of active mouse L1s: a driver of transcriptome evolution?

Por Zemojtel, Tomasz, Penzkofer, Tobias, Schultz, Jörg, Dandekar, Thomas, Badge, Richard, Vingron, Martin
Publicado em 2007

L1 Hybridization Enrichment: A Method for Directly Accessing De Novo L1 Insertions in the Human Germline

Por Freeman, Peter, Macfarlane, Catriona, Collier, Pamela, Jeffreys, Alec J, Badge, Richard M
Publicado em 2011

A novel L1 retrotransposon marker for HeLa cell line identification

Por Rahbari, Raheleh, Sheahan, Tom, Modes, Vasileios, Collier, Pam, Macfarlane, Catriona, Badge, Richard M.
Publicado em 2009

LINE-1 Elements in Structural Variation and Disease

Por Beck, Christine R., Garcia-Perez, José Luis, Badge, Richard M., Moran, John V.
Publicado em 2011

An epi [c] genetic battle: LINE-1 retrotransposons and intragenomic conflict in humans

Por Muñoz-Lopez, Martin, Macia, Angela, Garcia-Cañadas, Marta, Badge, Richard M, Garcia-Perez, Jose L
Publicado em 2011

L1Base 2: more retrotransposition-active LINE-1s, more mammalian genomes

Por Penzkofer, Tobias, Jäger, Marten, Figlerowicz, Marek, Badge, Richard, Mundlos, Stefan, Robinson, Peter N., Zemojtel, Tomasz
Publicado no Nucleic Acids Res (2017)

The Roles of the Saccharomyces cerevisiae RecQ Helicase SGS1 in Meiotic Genome Surveillance

Por Amin, Amit Dipak, Chaix, Alexandre B. H., Mason, Robert P., Badge, Richard M., Borts, Rhona H.
Publicado em 2010

Hot L1s account for the bulk of retrotransposition in the human population

Por Brouha, Brook, Schustak, Joshua, Badge, Richard M., Lutz-Prigge, Sheila, Farley, Alexander H., Moran, John V., Kazazian, Haig H.
Publicado em 2003

LINE-1 Retrotransposition Activity in Human Genomes

Por Beck, Christine R., Collier, Pamela, Macfarlane, Catriona, Malig, Maika, Kidd, Jeffrey M., Eichler, Evan E., Badge, Richard M., Moran, John V.
Publicado em 2010

Transduction-Specific ATLAS (TS-ATLAS) reveals a cohort of highly active L1 retrotransposons in human populations

Por Macfarlane, Catriona M., Collier, Pamela, Rahbari, Raheleh, Beck, Christine R., Wagstaff, John F., Igoe, Samantha, Moran, John V., Badge, Richard M.
Publicado em 2013

Epigenetic Control of Retrotransposon Expression in Human Embryonic Stem Cells

Por Macia, Angela, Muñoz-Lopez, Martin, Cortes, Jose Luis, Hastings, Robert K., Morell, Santiago, Lucena-Aguilar, Gema, Marchal, Juan Antonio, Badge, Richard M., Garcia-Perez, Jose Luis
Publicado em 2011

Evidence of Convergent Evolution in Humans and Macaques Supports an Adaptive Role for Copy Number Variation of the β-Defensin-2 Gene

Por Ottolini, Barbara, Hornsby, Michael J., Abujaber, Razan, MacArthur, Jacqueline A.L., Badge, Richard M., Schwarzacher, Trude, Albertson, Donna G., Bevins, Charles L., Solnick, Jay V., Hollox, Edward J.
Publicado no Genome Biol Evol (2014)