New methods for next generation sequencing based microRNA expression profiling

Por Buermans, Henk PJ, Ariyurek, Yavuz, van Ommen, Gertjan, den Dunnen, Johan T, 't Hoen, Peter AC
Publicado em 2010

The Complete Chloroplast Genome of 17 Individuals of Pest Species Jacobaea vulgaris: SNPs, Microsatellites and Barcoding Markers for Population and Phylogenetic Studies

Por Doorduin, Leonie, Gravendeel, Barbara, Lammers, Youri, Ariyurek, Yavuz, Chin-A-Woeng, Thomas, Vrieling, Klaas
Publicado em 2011

High-Resolution Whole-Genome Sequencing Reveals That Specific Chromatin Domains from Most Human Chromosomes Associate with Nucleoli

Por van Koningsbruggen, Silvana, Gierliński, Marek, Schofield, Pietá, Martin, David, Barton, Geoffey J., Ariyurek, Yavuz, den Dunnen, Johan T., Lamond, Angus I.
Publicado em 2010

Non-sequential and multi-step splicing of the dystrophin transcript

Por Gazzoli, Isabella, Pulyakhina, Irina, Verwey, Nisha E., Ariyurek, Yavuz, Laros, Jeroen F. J., 't Hoen, Peter A. C., Aartsma-Rus, Annemieke
Publicado no RNA Biol (2015)

Experiences with array-based sequence capture; toward clinical applications

Por Almomani, Rowida, van der Heijden, Jaap, Ariyurek, Yavuz, Lai, Yuching, Bakker, Egbert, van Galen, Michiel, Breuning, Martijn H, den Dunnen, Johan T
Publicado em 2011

New insights into domestication of carrot from root transcriptome analyses

Por Rong, Jun, Lammers, Youri, Strasburg, Jared L, Schidlo, Natasha S, Ariyurek, Yavuz, de Jong, Tom J, Klinkhamer, Peter GL, Smulders, Marinus JM, Vrieling, Klaas
Publicado em 2014

Diagnosis of Fanconi Anemia: Mutation Analysis by Next-Generation Sequencing

Por Ameziane, Najim, Sie, Daoud, Dentro, Stefan, Ariyurek, Yavuz, Kerkhoven, Lianne, Joenje, Hans, Dorsman, Josephine C., Ylstra, Bauke, Gille, Johan J. P., Sistermans, Erik A., de Winter, Johan P.
Publicado em 2012

Determining the quality and complexity of next-generation sequencing data without a reference genome

Por Anvar, Seyed Yahya, Khachatryan, Lusine, Vermaat, Martijn, van Galen, Michiel, Pulyakhina, Irina, Ariyurek, Yavuz, Kraaijeveld, Ken, den Dunnen, Johan T, de Knijff, Peter, ’t Hoen, Peter AC, Laros, Jeroen FJ
Publicado no Genome Biol (2014)

Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms

Por 't Hoen, Peter A. C., Ariyurek, Yavuz, Thygesen, Helene H., Vreugdenhil, Erno, Vossen, Rolf H. A. M., de Menezes, Renée X., Boer, Judith M., van Ommen, Gert-Jan B., den Dunnen, Johan T.
Publicado em 2008

Tissue-specific transcript annotation and expression profiling with complementary next-generation sequencing technologies

Por Hestand, Matthew S., Klingenhoff, Andreas, Scherf, Matthias, Ariyurek, Yavuz, Ramos, Yolande, van Workum, Wilbert, Suzuki, Makoto, Werner, Thomas, van Ommen, Gert-Jan B., den Dunnen, Johan T., Harbers, Matthias, 't Hoen, Peter A.C.
Publicado em 2010

Genome-wide assessment of differential roles for p300 and CBP in transcription regulation

Por Ramos, Yolande F. M., Hestand, Matthew S., Verlaan, Matty, Krabbendam, Elise, Ariyurek, Yavuz, van Galen, Michiel, van Dam, Hans, van Ommen, Gert-Jan B., den Dunnen, Johan T., Zantema, Alt, ′t Hoen, Peter A. C.
Publicado em 2010

Parental haplotype-specific single-cell transcriptomics reveal incomplete epigenetic reprogramming in human female germ cells

Por Vértesy, Ábel, Arindrarto, Wibowo, Roost, Matthias S., Reinius, Björn, Torrens-Juaneda, Vanessa, Bialecka, Monika, Moustakas, Ioannis, Ariyurek, Yavuz, Kuijk, Ewart, Mei, Hailiang, Sandberg, Rickard, van Oudenaarden, Alexander, Chuva de Sousa Lopes, Susana M.
Publicado no Nat Commun (2018)

Directed adenovirus evolution using engineered mutator viral polymerases

Por Uil, Taco G., Vellinga, Jort, de Vrij, Jeroen, van den Hengel, Sanne K., Rabelink, Martijn J. W. E., Cramer, Steve J., Eekels, Julia J. M., Ariyurek, Yavuz, van Galen, Michiel, Hoeben, Rob C.
Publicado em 2011

Full-length mRNA sequencing uncovers a widespread coupling between transcription initiation and mRNA processing

Por Anvar, Seyed Yahya, Allard, Guy, Tseng, Elizabeth, Sheynkman, Gloria M., de Klerk, Eleonora, Vermaat, Martijn, Yin, Raymund H., Johansson, Hans E., Ariyurek, Yavuz, den Dunnen, Johan T., Turner, Stephen W., ‘t Hoen, Peter A. C.
Publicado no Genome Biol (2018)

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Por Pedotti, Paola, 't Hoen, Peter AC, Vreugdenhil, Erno, Schenk, Geert J, Vossen, Rolf HAM, Ariyurek, Yavuz, de Hollander, Mattias, Kuiper, Rowan, van Ommen, Gertjan JB, den Dunnen, Johan T, Boer, Judith M, de Menezes, Renée X
Publicado em 2008

Huntington's disease biomarker progression profile identified by transcriptome sequencing in peripheral blood

Por Mastrokolias, Anastasios, Ariyurek, Yavuz, Goeman, Jelle J, van Duijn, Erik, Roos, Raymund AC, van der Mast, Roos C, van Ommen, GertJan B, den Dunnen, Johan T, 't Hoen, Peter AC, van Roon-Mom, Willeke MC
Publicado no Eur J Hum Genet (2015)

Genetic Heterogeneity in Rubinstein-Taybi Syndrome: Mutations in Both the CBP and EP300 Genes Cause Disease

Por Roelfsema, Jeroen H., White, Stefan J., Ariyürek, Yavuz, Bartholdi, Deborah, Niedrist, Dunja, Papadia, Francesco, Bacino, Carlos A., den Dunnen, Johan T., van Ommen, Gert-Jan B., Breuning, Martijn H., Hennekam, Raoul C., Peters, Dorien J. M.
Publicado em 2005

Terminal Osseous Dysplasia Is Caused by a Single Recurrent Mutation in the FLNA Gene

Por Sun, Yu, Almomani, Rowida, Aten, Emmelien, Celli, Jacopo, van der Heijden, Jaap, Venselaar, Hanka, Robertson, Stephen P., Baroncini, Anna, Franco, Brunella, Basel-Vanagaite, Lina, Horii, Emiko, Drut, Ricardo, Ariyurek, Yavuz, den Dunnen, Johan T., Breuning, Martijn H.
Publicado em 2010

KeyGenes, a Tool to Probe Tissue Differentiation Using a Human Fetal Transcriptional Atlas

Por Roost, Matthias S., van Iperen, Liesbeth, Ariyurek, Yavuz, Buermans, Henk P., Arindrarto, Wibowo, Devalla, Harsha D., Passier, Robert, Mummery, Christine L., Carlotti, Françoise, de Koning, Eelco J.P., van Zwet, Erik W., Goeman, Jelle J., Chuva de Sousa Lopes, Susana M.
Publicado no Stem Cell Reports (2015)

DeepSAGE Reveals Genetic Variants Associated with Alternative Polyadenylation and Expression of Coding and Non-coding Transcripts

Por Zhernakova, Daria V., de Klerk, Eleonora, Westra, Harm-Jan, Mastrokolias, Anastasios, Amini, Shoaib, Ariyurek, Yavuz, Jansen, Rick, Penninx, Brenda W., Hottenga, Jouke J., Willemsen, Gonneke, de Geus, Eco J., Boomsma, Dorret I., Veldink, Jan H., van den Berg, Leonard H., Wijmenga, Cisca, den Dunnen, Johan T., van Ommen, Gert-Jan B., 't Hoen, Peter A. C., Franke, Lude
Publicado em 2013