Rain induces temporary shifts in epiphytic bacterial communities of cucumber and tomato fruit

per Allard, Sarah M., Ottesen, Andrea R., Micallef, Shirley A.
Publicat a Sci Rep (2020)

Feasibility of using alternative swabs and storage solutions for paired SARS-CoV-2 detection and microbiome analysis in the hospital environment

per Minich, Jeremiah, Ali, Farhana, Marotz, Clarisse, Belda-Ferre, Pedro, Chiang, Leslie, Shaffer, Justin P., Carpenter, Carolina S., McDonald, Daniel, Gilbert, Jack, Allard, Sarah M., Allen, Eric E, Knight, Rob, Sweeney, Daniel A., Swafford, Austin D.
Publicat a Res Sq (2020)

Feasibility of using alternative swabs and storage solutions for paired SARS-CoV-2 detection and microbiome analysis in the hospital environment

per Minich, Jeremiah J., Ali, Farhana, Marotz, Clarisse, Belda-Ferre, Pedro, Chiang, Leslie, Shaffer, Justin P., Carpenter, Carolina S., McDonald, Daniel, Gilbert, Jack, Allard, Sarah M., Allen, Eric E., Knight, Rob, Sweeney, Daniel A., Swafford, Austin D.
Publicat a Microbiome (2021)

Feasibility of using alternative swabs and storage solutions for paired SARS-CoV-2 detection and microbiome analysis in the hospital environment

per Minich, Jeremiah J, Ali, Farhana, Marotz, Clarisse, Belda-Ferre, Pedro, Chiang, Leslie, Shaffer, Justin P., Carpenter, Carolina S., McDonald, Daniel, Gilbert, Jack A, Allard, Sarah M., Allen, Eric E, Knight, Rob, Sweeney, Daniel A, Swafford, Austin D.
Publicat a medRxiv (2020)

Prevalence of Salmonella and Listeria monocytogenes in non-traditional irrigation waters in the Mid-Atlantic United States is affected by water type, season, and recovery method

per Sharma, Manan, Handy, Eric T., East, Cheryl L., Kim, Seongyun, Jiang, Chengsheng, Callahan, Mary Theresa, Allard, Sarah M., Micallef, Shirley, Craighead, Shani, Anderson-Coughlin, Brienna, Gartley, Samantha, Vanore, Adam, Kniel, Kalmia E., Haymaker, Joseph, Duncan, Rico, Foust, Derek, White, Chanelle, Taabodi, Maryam, Hashem, Fawzy, Parveen, Salina, May, Eric, Bui, Anthony, Craddock, Hillary, Kulkarni, Prachi, Murray, Rianna T., Sapkota, Amy R.
Publicat a PLoS One (2020)

Longitudinal Assessment of the Dynamics of Escherichia coli, Total Coliforms, Enterococcus spp., and Aeromonas spp. in Alternative Irrigation Water Sources: a CONSERVE Study

per Solaiman, Sultana, Allard, Sarah M., Callahan, Mary Theresa, Jiang, Chengsheng, Handy, Eric, East, Cheryl, Haymaker, Joseph, Bui, Anthony, Craddock, Hillary, Murray, Rianna, Kulkarni, Prachi, Anderson-Coughlin, Brienna, Craighead, Shani, Gartley, Samantha, Vanore, Adam, Duncan, Rico, Foust, Derek, Taabodi, Maryam, Sapkota, Amir, May, Eric, Hashem, Fawzy, Parveen, Salina, Kniel, Kalmia, Sharma, Manan, Sapkota, Amy R., Micallef, Shirley A.
Publicat a Appl Environ Microbiol (2020)

Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems

per Allard, Sarah M., Costa, Matthew T., Bulseco, Ashley N., Helfer, Véronique, Wilkins, Laetitia G. E., Hassenrück, Christiane, Zengler, Karsten, Zimmer, Martin, Erazo, Natalia, Mazza Rodrigues, Jorge L., Duke, Norman, Melo, Vânia M. M., Vanwonterghem, Inka, Junca, Howard, Makonde, Huxley M., Jiménez, Diego Javier, Tavares, Tallita C. L., Fusi, Marco, Daffonchio, Daniele, Duarte, Carlos M., Peixoto, Raquel S., Rosado, Alexandre S., Gilbert, Jack A., Bowman, Jeff
Publicat a mSystems (2020)

SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment

per Marotz, Clarisse, Belda-Ferre, Pedro, Ali, Farhana, Das, Promi, Huang, Shi, Cantrell, Kalen, Jiang, Lingjing, Martino, Cameron, Diner, Rachel E., Rahman, Gibraan, McDonald, Daniel, Armstrong, George, Kodera, Sho, Donato, Sonya, Ecklu-Mensah, Gertrude, Gottel, Neil, Salas Garcia, Mariana C., Chiang, Leslie Y., Salido, Rodolfo A., Shaffer, Justin P., Bryant, Mac Kenzie, Sanders, Karenina, Humphrey, Greg, Ackermann, Gail, Haiminen, Niina, Beck, Kristen L., Kim, Ho-Cheol, Carrieri, Anna Paola, Parida, Laxmi, Vázquez-Baeza, Yoshiki, Torriani, Francesca J., Knight, Rob, Gilbert, Jack, Sweeney, Daniel A., Allard, Sarah M.
Publicat a Microbiome (2021)

Current progress and future opportunities in applications of bioinformatics for biodefense and pathogen detection: report from the Winter Mid-Atlantic Microbiome Meet-up, College P...

per Meisel, Jacquelyn S., Nasko, Daniel J., Brubach, Brian, Cepeda-Espinoza, Victoria, Chopyk, Jessica, Corrada-Bravo, Héctor, Fedarko, Marcus, Ghurye, Jay, Javkar, Kiran, Olson, Nathan D., Shah, Nidhi, Allard, Sarah M., Bazinet, Adam L., Bergman, Nicholas H., Brown, Alexis, Caporaso, J. Gregory, Conlan, Sean, DiRuggiero, Jocelyne, Forry, Samuel P., Hasan, Nur A., Kralj, Jason, Luethy, Paul M., Milton, Donald K., Ondov, Brian D., Preheim, Sarah, Ratnayake, Shashikala, Rogers, Stephanie M., Rosovitz, M. J., Sakowski, Eric G., Schliebs, Nils Oliver, Sommer, Daniel D., Ternus, Krista L., Uritskiy, Gherman, Zhang, Sean X., Pop, Mihai, Treangen, Todd J.
Publicat a Microbiome (2018)

Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment

per Marotz, Clarisse, Belda-Ferre, Pedro, Ali, Farhana, Das, Promi, Huang, Shi, Cantrell, Kalen, Jiang, Lingjing, Martino, Cameron, Diner, Rachel E., Rahman, Gibraan, McDonald, Daniel, Armstrong, George, Kodera, Sho, Donato, Sonya, Ecklu-Mensah, Gertrude, Gottel, Neil, Garcia, Mariana C. Salas, Chiang, Leslie Y., Salido, Rodolfo A., Shaffer, Justin P., Bryant, MacKenzie, Sanders, Karenina, Humphrey, Greg, Ackermann, Gail, Haiminen, Niina, Beck, Kristen L., Kim, Ho-Cheol, Carrieri, Anna Paola, Parida, Laxmi, Vázquez-Baeza, Yoshiki, Torriani, Francesca J., Knight, Rob, Gilbert, Jack A., Sweeney, Daniel A., Allard, Sarah M.
Publicat a medRxiv (2020)