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DBS: a fast and informative segmentation algorithm for DNA copy number analysis
DBS: a fast and informative segmentation algorithm for DNA copy number analysis

Towards a HPC-oriented parallel implementation of a learning algorithm for bioinformatics applications
Evaporative cooling feature selection for genotypic data involving interactions

A Java-based tool for the design of classification microarrays
A Java-based tool for the design of classification microarrays

CGHPRO – A comprehensive data analysis tool for array CGH
Estimation of alternative splicing isoform frequencies from RNA-Seq data

MutScan: fast detection and visualization of target mutations by scanning FASTQ data
FOUNTAIN: A JAVA open-source package to assist large sequencing projects

Suffix tree searcher: exploration of common substrings in large DNA sequence sets
jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units

MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools
Development of a Membrane-Bound Random DNA Sequence Combinatorial Array Recognition Surface (CARS)

Genetic Code Analysis Toolkit: A novel tool to explore the coding properties of the genetic code and DNA sequences
Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles

Deriving Quantitative Dynamics Information for Proteins and RNAs using ROTDIF with a Graphical User Interface
Clustering ionic flow blockade toggles with a Mixture of HMMs

VizStruct: exploratory visualization for gene expression profiling
Accelerating epistasis analysis in human genetics with consumer graphics hardware

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