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DBS: a fast and informative segmentation algorithm for DNA copy number analysis
DBS: a fast and informative segmentation algorithm for DNA copy number analysis

Towards a HPC-oriented parallel implementation of a learning algorithm for bioinformatics applications
A Java-based tool for the design of classification microarrays

A Java-based tool for the design of classification microarrays
Evaporative cooling feature selection for genotypic data involving interactions

FOUNTAIN: A JAVA open-source package to assist large sequencing projects
Mapping-free variant calling using haplotype reconstruction from k-mer frequencies

Accelerating epistasis analysis in human genetics with consumer graphics hardware
CGHPRO – A comprehensive data analysis tool for array CGH

Assessing the significance of conserved genomic aberrations using high resolution genomic microarrays.
Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays

MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools
Development of a Membrane-Bound Random DNA Sequence Combinatorial Array Recognition Surface (CARS)

Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles
Genetic Code Analysis Toolkit: A novel tool to explore the coding properties of the genetic code and DNA sequences

Estimation of alternative splicing isoform frequencies from RNA-Seq data
Sockeye: A 3D Environment for Comparative Genomics

MutScan: fast detection and visualization of target mutations by scanning FASTQ data
jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units

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