IsoMiRmap: fast, deterministic and exhaustive mining of isomiRs from short RNA-seq datasets

MOTIVATION: MicroRNA (miRNA) precursor arms give rise to multiple isoforms simultaneously called ‘isomiRs.’ IsomiRs from the same arm typically differ by a few nucleotides at either their 5′ or 3′ termini or both. In humans, the identities and abundances of isomiRs depend on a person’s sex and genet...

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Bibliografiska uppgifter
I publikationen:Bioinformatics
Huvudupphovsmän: Loher, Phillipe, Karathanasis, Nestoras, Londin, Eric, F. Bray, Paul, Pliatsika, Venetia, Telonis, Aristeidis G., Rigoutsos, Isidore
Materialtyp: Artigo
Språk:Inglês
Publicerad: Oxford University Press 2021
Ämnen:
Original Papers
Länkar:https://ncbi.nlm.nih.gov/pmc/articles/PMC8317110/
https://ncbi.nlm.nih.gov/pubmed/33471076
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1093/bioinformatics/btab016
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