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Managing Contamination and Diverse Bacterial Loads in 16S rRNA Deep Sequencing of Clinical Samples: Implications of the Law of Small Numbers

In this article, we investigate patterns of microbial DNA contamination in targeted 16S rRNA amplicon sequencing (16S deep sequencing) and demonstrate how this can be used to filter background bacterial DNA in diagnostic microbiology. We also investigate the importance of sequencing depth. We first...

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Detalhes bibliográficos
Publicado no:mBio
Main Authors: Dyrhovden, Ruben, Rippin, Martin, Øvrebø, Kjell Kåre, Nygaard, Randi M., Ulvestad, Elling, Kommedal, Øyvind
Formato: Artigo
Idioma:Inglês
Publicado em: American Society for Microbiology 2021
Assuntos:
Acesso em linha:https://ncbi.nlm.nih.gov/pmc/articles/PMC8262989/
https://ncbi.nlm.nih.gov/pubmed/34101489
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1128/mBio.00598-21
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