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Mi3-GPU: MCMC-based Inverse Ising Inference on GPUs for protein covariation analysis
Inverse Ising inference is a method for inferring the coupling parameters of a Potts/Ising model based on observed site-covariation, which has found important applications in protein physics for detecting interactions between residues in protein families. We introduce Mi3-GPU (“mee-three”, for MCMC...
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| Publicado no: | Comput Phys Commun |
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| Main Authors: | , |
| Formato: | Artigo |
| Idioma: | Inglês |
| Publicado em: |
2020
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| Assuntos: | |
| Acesso em linha: | https://ncbi.nlm.nih.gov/pmc/articles/PMC7944406/ https://ncbi.nlm.nih.gov/pubmed/33716309 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1016/j.cpc.2020.107312 |
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