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Optimizing performance of GATK workflows using Apache Arrow In-Memory data framework

BACKGROUND: Immense improvements in sequencing technologies enable producing large amounts of high throughput and cost effective next-generation sequencing (NGS) data. This data needs to be processed efficiently for further downstream analyses. Computing systems need this large amounts of data close...

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Detalles Bibliográficos
Publicado en:BMC Genomics
Main Authors: Ahmad, Tanveer, Ahmed, Nauman, Al-Ars, Zaid, Hofstee, H. Peter
Formato: Artigo
Idioma:Inglês
Publicado: BioMed Central 2020
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Acceso en liña:https://ncbi.nlm.nih.gov/pmc/articles/PMC7677819/
https://ncbi.nlm.nih.gov/pubmed/33208101
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12864-020-07013-y
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