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pmTM-align: scalable pairwise and multiple structure alignment with Apache Spark and OpenMP

BACKGROUND: Structure comparison can provide useful information to identify functional and evolutionary relationship between proteins. With the dramatic increase of protein structure data in the Protein Data Bank, computation time quickly becomes the bottleneck for large scale structure comparisons....

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Veröffentlicht in:BMC Bioinformatics
Hauptverfasser: Chen, Weiya, Yao, Chun, Guo, Yingzhong, Wang, Yan, Xue, Zhidong
Format: Artigo
Sprache:Inglês
Veröffentlicht: BioMed Central 2020
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Online Zugang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7526426/
https://ncbi.nlm.nih.gov/pubmed/32993484
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-03757-2
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