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pmTM-align: scalable pairwise and multiple structure alignment with Apache Spark and OpenMP

BACKGROUND: Structure comparison can provide useful information to identify functional and evolutionary relationship between proteins. With the dramatic increase of protein structure data in the Protein Data Bank, computation time quickly becomes the bottleneck for large scale structure comparisons....

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Podrobná bibliografie
Vydáno v:BMC Bioinformatics
Hlavní autoři: Chen, Weiya, Yao, Chun, Guo, Yingzhong, Wang, Yan, Xue, Zhidong
Médium: Artigo
Jazyk:Inglês
Vydáno: BioMed Central 2020
Témata:
On-line přístup:https://ncbi.nlm.nih.gov/pmc/articles/PMC7526426/
https://ncbi.nlm.nih.gov/pubmed/32993484
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1186/s12859-020-03757-2
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