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Whole-Genome k-mer Topic Modeling Associates Bacterial Families
Alignment-free k-mer-based algorithms in whole genome sequence comparisons remain an ongoing challenge. Here, we explore the possibility to use Topic Modeling for organism whole-genome comparisons. We analyzed 30 complete genomes from three bacterial families by topic modeling. For this, each genome...
Gespeichert in:
| Veröffentlicht in: | Genes (Basel) |
|---|---|
| Hauptverfasser: | , , , , , |
| Format: | Artigo |
| Sprache: | Inglês |
| Veröffentlicht: |
MDPI
2020
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| Schlagworte: | |
| Online Zugang: | https://ncbi.nlm.nih.gov/pmc/articles/PMC7074292/ https://ncbi.nlm.nih.gov/pubmed/32075081 https://ncbi.nlm.nih.govhttp://dx.doi.org/10.3390/genes11020197 |
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