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Adapting free energy perturbation simulations for large macrocyclic ligands: how to dissect contributions from direct binding and free ligand flexibility

Large and flexible ligands gain increasing interest in the development of bioactive agents. They challenge the applicability of computational ligand optimization strategies originally developed for small molecules. Free energy perturbation (FEP) is often used for predicting binding affinities of sma...

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Bibliografische gegevens
Gepubliceerd in:Chem Sci
Hoofdauteurs: Wallraven, Kerstin, Holmelin, Fredrik L., Glas, Adrian, Hennig, Sven, Frolov, Andrey I., Grossmann, Tom N.
Formaat: Artigo
Taal:Inglês
Gepubliceerd in: Royal Society of Chemistry 2020
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Online toegang:https://ncbi.nlm.nih.gov/pmc/articles/PMC7057854/
https://ncbi.nlm.nih.gov/pubmed/32180932
https://ncbi.nlm.nih.govhttp://dx.doi.org/10.1039/c9sc04705k
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